RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 STRAPQ9Y3F4 350 aaKnown RBP11.18□□□□□ -0.62
CSTF2-201ENST00000372972 TLN1Q9Y490 2541 aaKnown RBP11.18□□□□□ -0.62
CSTF2-201ENST00000372972 IGHV3OR15-7A0A075B7D8 119 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 CCKARP32238 428 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 RBPJQ06330 500 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 CATR1Q13166 79 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 CR1LQ2VPA4 569 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 C10orf91Q5T1B1 145 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 TMEM108Q6UXF1 575 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 UNQ6494/PRO21346Q6UXR6 183 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 ZNF808Q8N4W9 903 aaPredicted RBP11.17□□□□□ -0.62
CSTF2-201ENST00000372972 NUP37Q8NFH4 326 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 ZCCHC14Q8WYQ9 949 aaKnown RBP11.17□□□□□ -0.62
CSTF2-201ENST00000372972 TSNAXQ99598 290 aaKnown RBP11.17□□□□□ -0.62
CSTF2-201ENST00000372972 DCTN5Q9BTE1 182 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 TMEM231Q9H6L2 316 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 IL19Q9UHD0 177 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 WSB1Q9Y6I7 421 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 NCOR2Q9Y618 2525 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 ODAMA1E959 279 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 F8W036 122 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 RNASEK-C17orf49H0YIS7 233 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 K7N7A8 449 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 SYNGR2O43760 224 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 TSPAN15O95858 294 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 PRH1P02810 166 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 MUC1P15941 1255 aaPredicted RBP11.17□□□□□ -0.62
CSTF2-201ENST00000372972 CAMLGP49069 296 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 RPL30P62888 115 aaKnown RBP11.17□□□□□ -0.62
CSTF2-201ENST00000372972 KLRB1Q12918 225 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 STX12Q86Y82 276 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 SVBPQ8N300 66 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 TMEM217Q8N7C4 229 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 TCTEX1D1Q8N7M0 179 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 C5orf30Q96GV9 206 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 ESRP2Q9H6T0 727 aaKnown RBP11.17□□□□□ -0.62
CSTF2-201ENST00000372972 FAM96BQ9Y3D0 163 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 MMP24Q9Y5R2 645 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 KIAA2026Q5HYC2 2103 aa11.17□□□□□ -0.62
CSTF2-201ENST00000372972 IGHV3-43A0A0B4J1X8 118 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 TRIM77I1YAP6 450 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 AGPAT2O15120 278 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 TXNL1O43396 289 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 CD5P06127 495 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 IGHV3-43DP0DP04 118 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 ADCYAP1P18509 176 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 PTAFRP25105 342 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 ATP6V0CP27449 155 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 TNFAIP6P98066 277 aaPredicted RBP11.16□□□□□ -0.62
CSTF2-201ENST00000372972 ZNF295-AS1Q8N0V1 137 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 COMMD1Q8N668 190 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 ZNRF1Q8ND25 227 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 SEC11CQ9BY50 192 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 GCM1Q9NP62 436 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 COA4Q9NYJ1 87 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 JKAMPQ9P055 326 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 RNF7Q9UBF6 113 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 CARHSP1Q9Y2V2 147 aaKnown RBP11.16□□□□□ -0.62
CSTF2-201ENST00000372972 BSNQ9UPA5 3926 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 DEFB108AA8MXU0 73 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 TOR1AO14656 332 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 RAMP3O60896 148 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 CLDN1O95832 211 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 IGHV1-46P01743 117 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 TNFSF4P23510 183 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 SULT1A1P50225 295 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 DVL1P1P54792 670 aaPredicted RBP11.16□□□□□ -0.62
CSTF2-201ENST00000372972 ZNF616Q08AN1 781 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 MIDNQ504T8 468 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 ZNF66Q6ZN08 573 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 OR2G3Q8NGZ4 309 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 FAM222BQ8WU58 562 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 TCTEX1D2Q8WW35 142 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 EDARADDQ8WWZ3 215 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 GNPNAT1Q96EK6 184 aaPredicted RBP11.16□□□□□ -0.62
CSTF2-201ENST00000372972 ATP5SQ99766 215 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 AGMATQ9BSE5 352 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 NKX6-2Q9C056 277 aaPredicted RBP11.16□□□□□ -0.62
CSTF2-201ENST00000372972 C19orf12Q9NSK7 152 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 PSG11Q9UQ72 335 aa11.16□□□□□ -0.62
CSTF2-201ENST00000372972 CHD3Q12873 2000 aaKnown RBP11.15□□□□□ -0.62
CSTF2-201ENST00000372972 MEX3AA1L020 520 aaKnown RBP11.15□□□□□ -0.62
CSTF2-201ENST00000372972 UMAD1C9J7I0 102 aa11.15□□□□□ -0.62
CSTF2-201ENST00000372972 FAM90A26D6RGX4 464 aa11.15□□□□□ -0.62
CSTF2-201ENST00000372972 FHITP49789 147 aa11.15□□□□□ -0.62
CSTF2-201ENST00000372972 TAS2R30P59541 319 aa11.15□□□□□ -0.62
CSTF2-201ENST00000372972 BTNL3Q6UXE8 466 aa11.15□□□□□ -0.62
CSTF2-201ENST00000372972 TMEM182Q6ZP80 229 aaPredicted RBP11.15□□□□□ -0.62
CSTF2-201ENST00000372972 SSX8Q7RTT4 187 aa11.15□□□□□ -0.62
CSTF2-201ENST00000372972 WFDC8Q8IUA0 241 aa11.15□□□□□ -0.62
CSTF2-201ENST00000372972 C17orf50Q8WW18 174 aa11.15□□□□□ -0.62
CSTF2-201ENST00000372972 HSD17B10Q99714 261 aaKnown RBP11.15□□□□□ -0.62
CSTF2-201ENST00000372972 NCOR1P1Q9H4R4 102 aa11.15□□□□□ -0.62
CSTF2-201ENST00000372972 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
CSTF2-201ENST00000372972 C17orf98A8MV24 154 aa11.14□□□□□ -0.63
CSTF2-201ENST00000372972 H3BP45 60 aa11.14□□□□□ -0.63
CSTF2-201ENST00000372972 ST8SIA5O15466 376 aa11.14□□□□□ -0.63
CSTF2-201ENST00000372972 C1QL1O75973 258 aa11.14□□□□□ -0.63
CSTF2-201ENST00000372972 DFFBO76075 338 aa11.14□□□□□ -0.63
CSTF2-201ENST00000372972 KRASP01116 189 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms