RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 COL5A1-AS1Q5SY13 56 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 NRTNQ99748 197 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 IL36RNQ9UBH0 155 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 S1PR2O95136 353 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 FAM106AQ4KMX7 169 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 UNQ5815/PRO19632Q6UWF5 114 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 PIMREGQ9BSJ6 248 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 DSPPQ9NZW4 1301 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 MYO9BQ13459 2157 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 CFDP00746 253 aaPredicted RBP9.99□□□□□ -0.81
VCL-202ENST00000372755 ALS2Q96Q42 1657 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 IGHV1-45A0A0A0MS14 117 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 OR2H2O95918 312 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 PEBP1P30086 187 aaKnown RBP9.99□□□□□ -0.81
VCL-202ENST00000372755 C8orf82Q6P1X6 216 aaPredicted RBP9.99□□□□□ -0.81
VCL-202ENST00000372755 FGF11Q92914 225 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 GALNT14Q96FL9 552 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 TMEM222Q9H0R3 208 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 ASAH2BP0C7U1 165 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 MFAP4P55083 255 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 TCTAP57738 103 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 IDI2-AS1Q9NZ38 188 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 FAM181BA6NEQ2 426 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 C17orf51A8MQB3 221 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 PATE3B3GLJ2 98 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 HLA-DQA1P01909 254 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 FABP2P12104 132 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 HOXB1P14653 301 aaPredicted RBP9.98□□□□□ -0.81
VCL-202ENST00000372755 GFRA1P56159 465 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 OR52M1Q8NGK5 317 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 LSM10Q969L4 123 aaKnown RBP9.98□□□□□ -0.81
VCL-202ENST00000372755 ZNF501Q96CX3 271 aaPredicted RBP9.98□□□□□ -0.81
VCL-202ENST00000372755 MAP1LC3AQ9H492 121 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 MIOXQ9UGB7 285 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 CROCCQ5TZA2 2017 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 CIRBPQ14011 172 aaKnown RBP9.98□□□□□ -0.81
VCL-202ENST00000372755 SMRP1Q8NCR6 262 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 TMEM45BQ96B21 275 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 RBKSQ9H477 322 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 LGALS3P17931 250 aaKnown RBP9.98□□□□□ -0.81
VCL-202ENST00000372755 RCC1P18754 421 aaPredicted RBP9.98□□□□□ -0.81
VCL-202ENST00000372755 PCSK4Q6UW60 755 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 PQLC2Q6ZP29 291 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 DDA1Q9BW61 102 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 DTX4Q9Y2E6 619 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 NUDT3O95989 172 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 C1QAP02745 245 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 TMPRSS3P57727 454 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 PMCHL1Q16048 86 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 CYB561D1Q8N8Q1 229 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 EAF1Q96JC9 268 aaPredicted RBP9.98□□□□□ -0.81
VCL-202ENST00000372755 GPR61Q9BZJ8 451 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 KLHDC2Q9Y2U9 406 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 NDUFB4O95168 129 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 TSPOP30536 169 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 ITLN1Q8WWA0 313 aa9.98□□□□□ -0.81
VCL-202ENST00000372755 hCG_38984A0A1B0GV85 526 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 AMY1AP04745 511 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 HSPB1P04792 205 aaKnown RBP9.97□□□□□ -0.81
VCL-202ENST00000372755 PMS2CLQ68D20 193 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 LOXL4Q96JB6 756 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 GUCD1Q96NT3 240 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 TMEM70Q9BUB7 260 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 PKIBQ9C010 78 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 PHLDA3Q9Y5J5 127 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 PGPA6NDG6 321 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 H7C2G1 150 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 IGSF11Q5DX21 431 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 DNLZQ5SXM8 178 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 OR4A47Q6IF82 309 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 TMEM252Q8N6L7 170 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 TPRX1Q8N7U7 411 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 TMEM52Q8NDY8 209 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 NUP37Q8NFH4 326 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 RBFOX2O43251 390 aaKnown RBP eCLIP9.97□□□□□ -0.81
VCL-202ENST00000372755 ANOS1P23352 680 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 ZPLD1Q8TCW7 415 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 RAXQ9Y2V3 346 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 LAMA4Q16363 1823 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 LOC107984156A0A0G2JMH3 177 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 OR2A4O95047 310 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 TMEM30BQ3MIR4 351 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 FAM209AQ5JX71 171 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 ARL17AQ8IVW1 177 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 OR2A7Q96R45 310 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 CISD1Q9NZ45 108 aaKnown RBP9.97□□□□□ -0.81
VCL-202ENST00000372755 FAM90A26D6RGX4 464 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 IGKV1D-16P01601 117 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 NANOS3P60323 173 aaKnown RBP9.97□□□□□ -0.81
VCL-202ENST00000372755 RUNX1Q01196 453 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 ATP5G2Q06055 141 aa9.97□□□□□ -0.81
VCL-202ENST00000372755 IGHV3OR16-12A0A075B7B8 117 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 CX3CL1P78423 397 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 C2orf83Q53S99 150 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 HCP5Q6MZN7 132 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 OR4B1Q8NGF8 309 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 WNT2BQ93097 391 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 IGHV3-72A0A0B4J1Y9 119 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 IGHV4-34P06331 123 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 ZNF250P15622 560 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms