RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 FAM3BP58499 235 aaPredicted RBP12.56□□□□□ -0.4
COL9A2-202ENST00000372748 TMEM170AQ8WVE7 144 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 SF3B5Q9BWJ5 86 aaKnown RBP12.56□□□□□ -0.4
COL9A2-202ENST00000372748 DEPPQ9NTK1 212 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 URB1O60287 2271 aaKnown RBP12.56□□□□□ -0.4
COL9A2-202ENST00000372748 AHCTF1Q8WYP5 2266 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 CTXN2P0C2S0 81 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 SRD5A2P31213 254 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 COA6Q5JTJ3 125 aaKnown RBP12.55□□□□□ -0.4
COL9A2-202ENST00000372748 ACSM6Q6P461 480 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 BEND2Q8NDZ0 799 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 PSMF1Q92530 271 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 OR51I2Q9H344 312 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 GPR35Q9HC97 309 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 KCNS2Q9ULS6 477 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 WDR1O75083 606 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 SCGB1D1O95968 90 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 HRASP01112 189 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 CYC1P08574 325 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 CHRNA7P36544 502 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 PMP22Q01453 160 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 SRYQ05066 204 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 TNFRSF9Q07011 255 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 SLC38A11Q08AI6 406 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 TCEAL6Q6IPX3 200 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 TMEM18Q96B42 140 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 ZNF552Q9H707 407 aaPredicted RBP12.55□□□□□ -0.4
COL9A2-202ENST00000372748 PINLYPA6NC86 204 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 NTN3O00634 580 aaPredicted RBP12.55□□□□□ -0.4
COL9A2-202ENST00000372748 PSMB3P49720 205 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 TGIF2LYQ8IUE0 185 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 MKXQ8IYA7 352 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 Q8NFD4 153 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 TECTBQ96PL2 329 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 R4GN57 208 aa12.55□□□□□ -0.4
COL9A2-202ENST00000372748 DOCK7Q96N67 2140 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 C5orf49A4QMS7 147 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A10PA6NDY2 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A18PA6NE21 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A16PA6NEW6 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A20PA6NIJ5 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A8PA6NJQ4 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A7PA6NKC0 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A22PA8MWA6 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A12PA8MX19 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A5PA8MXJ8 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A23PA8MXZ1 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 B4E171 279 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 CLDN1O95832 211 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 IGLV2-14P01704 120 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A15PP0C7V4 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A13PP0C7W8 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A14PP0C7W9 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 FAM90A24PP0C7X0 464 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 EGR1P18146 543 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 GDF1P27539 372 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 TSPAN7P41732 249 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 PCBD1P61457 104 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 OR2T10Q8NGZ9 312 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 SPSB4Q96A44 273 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 PINX1Q96BK5 328 aaKnown RBP12.54□□□□□ -0.4
COL9A2-202ENST00000372748 ACY3Q96HD9 319 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 C1QTNF5Q9BXJ0 243 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 LPAL2Q16609 132 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 AGMATQ9BSE5 352 aa12.54□□□□□ -0.4
COL9A2-202ENST00000372748 TRAV24A0A0B4J272 114 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 C1QTNF9BB2RNN3 333 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 NGFP01138 241 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 GYPAP02724 150 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 SRSF7Q16629 238 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL9A2-202ENST00000372748 ZNF585BQ52M93 769 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 ACTL10Q5JWF8 245 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 SPINK14Q6IE38 97 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 MRPL21Q7Z2W9 205 aaKnown RBP12.53□□□□□ -0.4
COL9A2-202ENST00000372748 PPP1R32Q7Z5V6 425 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 OR51B6Q9H340 312 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 DOCK11Q5JSL3 2073 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 DOCK10Q96BY6 2186 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 PAGE4O60829 102 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 SLC25A6P12236 298 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 CD33P20138 364 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 WNT5AP41221 380 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 PDLIM4P50479 330 aa12.53□□□□□ -0.4
COL9A2-202ENST00000372748 REPIN1Q9BWE0 567 aaKnown RBP12.53□□□□□ -0.4
COL9A2-202ENST00000372748 LILRA1O75019 489 aa12.52□□□□□ -0.4
COL9A2-202ENST00000372748 IQCJQ1A5X6 159 aa12.52□□□□□ -0.4
COL9A2-202ENST00000372748 CEACAM21Q3KPI0 293 aa12.52□□□□□ -0.4
COL9A2-202ENST00000372748 TMEM256Q8N2U0 113 aa12.52□□□□□ -0.4
COL9A2-202ENST00000372748 KCNE4Q8WWG9 221 aa12.52□□□□□ -0.4
COL9A2-202ENST00000372748 OR6C3Q9NZP0 311 aa12.52□□□□□ -0.4
COL9A2-202ENST00000372748 FAM78BQ5VT40 261 aa12.52□□□□□ -0.41
COL9A2-202ENST00000372748 OR10G9Q8NGN4 311 aa12.52□□□□□ -0.41
COL9A2-202ENST00000372748 OR10G7Q8NGN6 311 aa12.52□□□□□ -0.41
COL9A2-202ENST00000372748 PRRG4Q9BZD6 226 aa12.52□□□□□ -0.41
COL9A2-202ENST00000372748 PRDM14Q9GZV8 571 aa12.52□□□□□ -0.41
COL9A2-202ENST00000372748 FOXG1P55316 489 aaPredicted RBP12.52□□□□□ -0.41
COL9A2-202ENST00000372748 LSM10Q969L4 123 aaKnown RBP12.52□□□□□ -0.41
COL9A2-202ENST00000372748 TMEM9BQ9NQ34 198 aa12.52□□□□□ -0.41
COL9A2-202ENST00000372748 FKBP11Q9NYL4 201 aa12.52□□□□□ -0.41
COL9A2-202ENST00000372748 DNAJC13O75165 2243 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms