RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 TMEM218A2RU14 115 aa20.79■□□□□ 0.92
CTSA-203ENST00000372459 TOR1AO14656 332 aa20.79■□□□□ 0.92
CTSA-203ENST00000372459 IGHV3-43DP0DP04 118 aa20.79■□□□□ 0.92
CTSA-203ENST00000372459 ZCCHC24Q8N2G6 241 aaKnown RBP20.79■□□□□ 0.92
CTSA-203ENST00000372459 GAFA1Q96PS6 74 aa20.79■□□□□ 0.92
CTSA-203ENST00000372459 ATG12O94817 140 aa20.79■□□□□ 0.92
CTSA-203ENST00000372459 EIF5AP63241 154 aaKnown RBP20.79■□□□□ 0.92
CTSA-203ENST00000372459 GPR157Q5UAW9 335 aa20.79■□□□□ 0.92
CTSA-203ENST00000372459 TGIF2LYQ8IUE0 185 aa20.79■□□□□ 0.92
CTSA-203ENST00000372459 FAM234AQ9H0X4 552 aa20.79■□□□□ 0.92
CTSA-203ENST00000372459 JPT1Q9UK76 154 aa20.79■□□□□ 0.92
CTSA-203ENST00000372459 GPR137BO60478 399 aa20.78■□□□□ 0.92
CTSA-203ENST00000372459 GYPAP02724 150 aa20.78■□□□□ 0.92
CTSA-203ENST00000372459 SLC25A6P12236 298 aa20.78■□□□□ 0.92
CTSA-203ENST00000372459 APOBEC3AP31941 199 aaPredicted RBP20.78■□□□□ 0.92
CTSA-203ENST00000372459 ZNF788Q6ZQV5 615 aa20.78■□□□□ 0.92
CTSA-203ENST00000372459 DMBX1Q8NFW5 382 aa20.78■□□□□ 0.92
CTSA-203ENST00000372459 RNASE11Q8TAA1 199 aaKnown RBP20.78■□□□□ 0.92
CTSA-203ENST00000372459 TMED6Q8WW62 240 aa20.78■□□□□ 0.92
CTSA-203ENST00000372459 EDARADDQ8WWZ3 215 aa20.78■□□□□ 0.92
CTSA-203ENST00000372459 DYNLRB1Q9NP97 96 aa20.78■□□□□ 0.92
CTSA-203ENST00000372459 A0A1B0GU03 582 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 SELLP14151 372 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 PVALBP20472 110 aaPredicted RBP20.77■□□□□ 0.92
CTSA-203ENST00000372459 C1orf87Q8N0U7 546 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 CA5BP1Q8WTZ4 195 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 FAM216AQ8WUB2 273 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 NEUROG1Q92886 237 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 LSM10Q969L4 123 aaKnown RBP20.77■□□□□ 0.92
CTSA-203ENST00000372459 RAB9BQ9NP90 201 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 MMP26Q9NRE1 261 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 DCAF16Q9NXF7 216 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 DSCAMO60469 2012 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 FAM157CP0CG43 387 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 TMEM33P57088 247 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 CATR1Q13166 79 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 LTC4SQ16873 150 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 ZNF585BQ52M93 769 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 IL34Q6ZMJ4 242 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 ZNF808Q8N4W9 903 aaPredicted RBP20.77■□□□□ 0.92
CTSA-203ENST00000372459 GPR146Q96CH1 333 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 CCL13Q99616 98 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 MS4A5Q9H3V2 200 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 GNG12Q9UBI6 72 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 FBXL17Q9UF56 701 aa20.77■□□□□ 0.92
CTSA-203ENST00000372459 DEFB108AA8MXU0 73 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 SIGLEC5O15389 551 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 NUPL2O15504 423 aaKnown RBP20.76■□□□□ 0.91
CTSA-203ENST00000372459 IGKV1-39P01597 117 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 IGKV1D-39P04432 117 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 GRNP28799 593 aaKnown RBP20.76■□□□□ 0.91
CTSA-203ENST00000372459 EIF4EBP1Q13541 118 aaPredicted RBP20.76■□□□□ 0.91
CTSA-203ENST00000372459 F2RL2O00254 374 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 POLR2GP62487 172 aaKnown RBP eCLIP20.76■□□□□ 0.91
CTSA-203ENST00000372459 ID3Q02535 119 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 EFNB3Q15768 340 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 CXorf66Q5JRM2 361 aaPredicted RBP20.76■□□□□ 0.91
CTSA-203ENST00000372459 DUX4L9Q6RFH8 374 aaPredicted RBP20.76■□□□□ 0.91
CTSA-203ENST00000372459 SVBPQ8N300 66 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 CLRN3Q8NCR9 226 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 SAT2Q96F10 170 aaPredicted RBP20.76■□□□□ 0.91
CTSA-203ENST00000372459 C5orf30Q96GV9 206 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 CALYQ9NYX4 217 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 LPAR3Q9UBY5 353 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 PSG11Q9UQ72 335 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 RNF115Q9Y4L5 304 aa20.76■□□□□ 0.91
CTSA-203ENST00000372459 TRAV38-1A0A0B4J264 116 aa20.75■□□□□ 0.91
CTSA-203ENST00000372459 A0A0G2JRQ6 117 aa20.75■□□□□ 0.91
CTSA-203ENST00000372459 NKX6-3A6NJ46 265 aa20.75■□□□□ 0.91
CTSA-203ENST00000372459 YPEL1O60688 119 aa20.75■□□□□ 0.91
CTSA-203ENST00000372459 EPHA1P21709 976 aa20.75■□□□□ 0.91
CTSA-203ENST00000372459 AKR1C2P52895 323 aa20.75■□□□□ 0.91
CTSA-203ENST00000372459 C10orf91Q5T1B1 145 aa20.75■□□□□ 0.91
CTSA-203ENST00000372459 RPL7L1Q6DKI1 246 aaKnown RBP20.75■□□□□ 0.91
CTSA-203ENST00000372459 EIF5AL1Q6IS14 154 aaKnown RBP20.75■□□□□ 0.91
CTSA-203ENST00000372459 YPEL2Q96QA6 119 aa20.75■□□□□ 0.91
CTSA-203ENST00000372459 AIFM2Q9BRQ8 373 aa20.75■□□□□ 0.91
CTSA-203ENST00000372459 C11orf1Q9H5F2 150 aa20.75■□□□□ 0.91
CTSA-203ENST00000372459 KCNJ16Q9NPI9 418 aa20.75■□□□□ 0.91
CTSA-203ENST00000372459 RAI1Q7Z5J4 1906 aaPredicted RBP20.75■□□□□ 0.91
CTSA-203ENST00000372459 NCOR2Q9Y618 2525 aa20.75■□□□□ 0.91
CTSA-203ENST00000372459 B9A039 149 aa20.74■□□□□ 0.91
CTSA-203ENST00000372459 ST8SIA5O15466 376 aa20.74■□□□□ 0.91
CTSA-203ENST00000372459 GAPDHP04406 335 aaKnown RBP20.74■□□□□ 0.91
CTSA-203ENST00000372459 MORN2Q502X0 79 aa20.74■□□□□ 0.91
CTSA-203ENST00000372459 FAM216BQ8N7L0 139 aa20.74■□□□□ 0.91
CTSA-203ENST00000372459 TSNAXQ99598 290 aaKnown RBP20.74■□□□□ 0.91
CTSA-203ENST00000372459 AGMATQ9BSE5 352 aa20.74■□□□□ 0.91
CTSA-203ENST00000372459 ZZEF1O43149 2961 aa20.74■□□□□ 0.91
CTSA-203ENST00000372459 TRGV10A0A0A0MS01 117 aa20.74■□□□□ 0.91
CTSA-203ENST00000372459 PITX3O75364 302 aa20.74■□□□□ 0.91
CTSA-203ENST00000372459 JTBO76095 146 aa20.74■□□□□ 0.91
CTSA-203ENST00000372459 CGB3P0DN86 165 aa20.74■□□□□ 0.91
CTSA-203ENST00000372459 CGB7P0DN87 165 aa20.74■□□□□ 0.91
CTSA-203ENST00000372459 CARHSP1Q9Y2V2 147 aaKnown RBP20.74■□□□□ 0.91
CTSA-203ENST00000372459 FAM74A7A6NL05 159 aa20.73■□□□□ 0.91
CTSA-203ENST00000372459 TMEM178BH3BS89 294 aa20.73■□□□□ 0.91
CTSA-203ENST00000372459 SSSCA1O60232 199 aa20.73■□□□□ 0.91
CTSA-203ENST00000372459 MMP9P14780 707 aa20.73■□□□□ 0.91
CTSA-203ENST00000372459 LOXL3P58215 753 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms