RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 CFAP46Q8IYW2 2715 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 CACNA1BQ00975 2339 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 DSCAML1Q8TD84 2053 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 IGHV1-69-2A0A0G2JMI3 117 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 NKX6-3A6NJ46 265 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 BCL2L11O43521 198 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 SERPINE2P07093 398 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 OMGP23515 440 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 S100A12P80511 92 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 MORN2Q502X0 79 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 OR8H3Q8N146 312 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 ZBTB34Q8NCN2 500 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 UBQLN2Q9UHD9 624 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 JPT1Q9UK76 154 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 NUP50Q9UKX7 468 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 LSM5Q9Y4Y9 91 aaKnown RBP12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 ABCA4P78363 2273 aa12.91□□□□□ -0.34
GTF3C5-204ENST00000372108 TANC2Q9HCD6 1990 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 KANTRA0A1W2PQU2 76 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 ADAM20O43506 726 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 FCN3O75636 299 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 IGKV1-39P01597 117 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 IGKV1D-39P04432 117 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 ZNF16P17020 682 aaPredicted RBP12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 AGAP20933 346 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 VDAC1P21796 283 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 ZNF585BQ52M93 769 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 ESCO2Q56NI9 601 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 AQP10Q96PS8 301 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 GNG12Q9UBI6 72 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 PSG11Q9UQ72 335 aa12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 SPTBN1Q01082 2364 aaKnown RBP12.9□□□□□ -0.34
GTF3C5-204ENST00000372108 TRGV10A0A0A0MS01 117 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 KBTBD11-OT1A0A1B0GTJ5 212 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 PCP4L1A6NKN8 68 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 K7EPK0 472 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 ST8SIA5O15466 376 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 YPEL1O60688 119 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 RLN2P04090 185 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 MSMO1Q15800 293 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 FAM71E2Q8N5Q1 922 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 ABHD14BQ96IU4 210 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 YPEL2Q96QA6 119 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 PLEKHF2Q9H8W4 249 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 LIN7CQ9NUP9 197 aaKnown RBP12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 CLN8Q9UBY8 286 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 CLEC18AA5D8T8 446 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 SPDEFO95238 335 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 RPL30P62888 115 aaKnown RBP12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 SMCO1Q147U7 214 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 UTF1Q5T230 341 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 LYPD2Q6UXB3 125 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 CLEC18CQ8NCF0 446 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 CORO2AQ92828 525 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 SDHAF2Q9NX18 166 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 SLC25A10Q9UBX3 287 aaPredicted RBP12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 USP24Q9UPU5 2620 aa12.89□□□□□ -0.35
GTF3C5-204ENST00000372108 LRBAP50851 2863 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 A0A0G2JRQ6 117 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 RNF212BA8MTL3 300 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 HKR1P10072 659 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 NDUFB7P17568 137 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 NUP62P37198 522 aaPredicted RBP12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 EDARADDQ8WWZ3 215 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 IGHV3-7P01780 117 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 PPOXP50336 477 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 ZNF134P52741 427 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 PXDC1Q5TGL8 231 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 ALKAL2Q6UX46 152 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 BTNL3Q6UXE8 466 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 LINC00518Q8N0U6 118 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 ST8SIA2Q92186 375 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 MARVELD3Q96A59 401 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 SPIN2AQ99865 258 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 SPIN2BQ9BPZ2 258 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 LINC00574Q9H8X3 128 aa12.88□□□□□ -0.35
GTF3C5-204ENST00000372108 HRNRQ86YZ3 2850 aaPredicted RBP12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 RPS10-NUDT3A0A1W2PQS6 291 aa12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 LYNX1G3V0Z9 82 aa12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 ST8SIA3O43173 380 aa12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 LYNX1P0DP58 116 aa12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 COL8A2P25067 703 aa12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 UBA52P62987 128 aaKnown RBP12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 HFEQ30201 348 aa12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 PCNPQ8WW12 178 aaKnown RBP12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 GPR146Q96CH1 333 aa12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 ZNF471Q9BX82 626 aaPredicted RBP12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 RAB9BQ9NP90 201 aa12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 ZFP57Q9NU63 452 aa12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 GFOD1Q9NXC2 390 aa12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 POMT1Q9Y6A1 747 aa12.87□□□□□ -0.35
GTF3C5-204ENST00000372108 PIGBOS1A0A0B4J2F0 54 aa12.86□□□□□ -0.35
GTF3C5-204ENST00000372108 ZNF729A6NN14 1252 aaPredicted RBP12.86□□□□□ -0.35
GTF3C5-204ENST00000372108 F5H0A9 414 aaPredicted RBP12.86□□□□□ -0.35
GTF3C5-204ENST00000372108 PROP1O75360 226 aa12.86□□□□□ -0.35
GTF3C5-204ENST00000372108 IGKV1-5P01602 117 aa12.86□□□□□ -0.35
GTF3C5-204ENST00000372108 BRWD1-AS2P59051 145 aa12.86□□□□□ -0.35
GTF3C5-204ENST00000372108 Q3ZCU0 254 aa12.86□□□□□ -0.35
GTF3C5-204ENST00000372108 CXorf66Q5JRM2 361 aaPredicted RBP12.86□□□□□ -0.35
GTF3C5-204ENST00000372108 DMBX1Q8NFW5 382 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms