RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 IL1F10Q8WWZ1 152 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 SMR3AQ99954 134 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 FAM212BQ9NTI7 297 aaPredicted RBP11.79□□□□□ -0.52
LDB3-204ENST00000372066 OR1A1Q9P1Q5 309 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 OR14J1Q9UGF5 321 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 LGALS8O00214 317 aa11.78□□□□□ -0.52
LDB3-204ENST00000372066 PITX3O75364 302 aa11.78□□□□□ -0.52
LDB3-204ENST00000372066 GOSR1O95249 250 aa11.78□□□□□ -0.52
LDB3-204ENST00000372066 IGHV3-13P01766 116 aa11.78□□□□□ -0.52
LDB3-204ENST00000372066 ZNF266Q14584 549 aa11.78□□□□□ -0.52
LDB3-204ENST00000372066 ZNF474Q6S9Z5 364 aaPredicted RBP11.78□□□□□ -0.52
LDB3-204ENST00000372066 SSX8Q7RTT4 187 aa11.78□□□□□ -0.52
LDB3-204ENST00000372066 FAM219AQ8IW50 185 aa11.78□□□□□ -0.52
LDB3-204ENST00000372066 SPAG16Q8N0X2 631 aa11.78□□□□□ -0.52
LDB3-204ENST00000372066 TCTEX1D1Q8N7M0 179 aa11.78□□□□□ -0.52
LDB3-204ENST00000372066 ERGIC1Q969X5 290 aa11.78□□□□□ -0.52
LDB3-204ENST00000372066 GALMQ96C23 342 aa11.78□□□□□ -0.52
LDB3-204ENST00000372066 LYRM2Q9NU23 88 aaPredicted RBP11.78□□□□□ -0.52
LDB3-204ENST00000372066 TMA7Q9Y2S6 64 aaKnown RBP11.78□□□□□ -0.52
LDB3-204ENST00000372066 RBM7Q9Y580 266 aaKnown RBP11.78□□□□□ -0.52
LDB3-204ENST00000372066 WRBO00258 174 aa11.77□□□□□ -0.53
LDB3-204ENST00000372066 MED6O75586 246 aa11.77□□□□□ -0.53
LDB3-204ENST00000372066 F2RL1P55085 397 aa11.77□□□□□ -0.53
LDB3-204ENST00000372066 NKX6-1P78426 367 aaPredicted RBP11.77□□□□□ -0.53
LDB3-204ENST00000372066 EWSR1Q01844 656 aaKnown RBP eCLIP11.77□□□□□ -0.53
LDB3-204ENST00000372066 SWI5Q1ZZU3 235 aa11.77□□□□□ -0.53
LDB3-204ENST00000372066 PXDC1Q5TGL8 231 aa11.77□□□□□ -0.53
LDB3-204ENST00000372066 PRAMEF6Q5VXH4 476 aa11.77□□□□□ -0.53
LDB3-204ENST00000372066 C5orf24Q7Z6I8 188 aa11.77□□□□□ -0.53
LDB3-204ENST00000372066 COMMD1Q8N668 190 aa11.77□□□□□ -0.53
LDB3-204ENST00000372066 BPIFCQ8NFQ6 507 aa11.77□□□□□ -0.53
LDB3-204ENST00000372066 PPP1R35Q8TAP8 253 aa11.77□□□□□ -0.53
LDB3-204ENST00000372066 S100PBPQ96BU1 408 aa11.77□□□□□ -0.53
LDB3-204ENST00000372066 BEX4Q9NWD9 120 aaPredicted RBP11.77□□□□□ -0.53
LDB3-204ENST00000372066 ZDHHC8Q9ULC8 765 aa11.77□□□□□ -0.53
LDB3-204ENST00000372066 STRAPQ9Y3F4 350 aaKnown RBP11.77□□□□□ -0.53
LDB3-204ENST00000372066 ABCA2Q9BZC7 2435 aa11.76□□□□□ -0.53
LDB3-204ENST00000372066 M0R1B8 84 aa11.76□□□□□ -0.53
LDB3-204ENST00000372066 PSPNO60542 156 aa11.76□□□□□ -0.53
LDB3-204ENST00000372066 SPP1P10451 314 aa11.76□□□□□ -0.53
LDB3-204ENST00000372066 IL2RGP31785 369 aa11.76□□□□□ -0.53
LDB3-204ENST00000372066 ZNF83P51522 516 aa11.76□□□□□ -0.53
LDB3-204ENST00000372066 KLF3P57682 345 aaPredicted RBP11.76□□□□□ -0.53
LDB3-204ENST00000372066 MST1LQ2TV78 715 aa11.76□□□□□ -0.53
LDB3-204ENST00000372066 NDRG3Q9UGV2 375 aa11.76□□□□□ -0.53
LDB3-204ENST00000372066 IGLV3-9A0A075B6K5 115 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 TMEM218A2RU14 115 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 SRRM5B3KS81 715 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 ATG12O94817 140 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 CEACAM6P40199 344 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 OR3A1P47881 315 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 CAV2P51636 162 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 CLEC9AQ6UXN8 241 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 ZNF826PQ6ZT77 177 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 OR51H1Q8NH63 302 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 LYPD6BQ8NI32 183 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 LRRC29Q8WV35 223 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 RAB40CQ96S21 281 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 SMIM3Q9BZL3 60 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 MSL2Q9HCI7 577 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 KCNS2Q9ULS6 477 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 A0A1W2PPR1 153 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 A8MXE2 369 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 C12orf77C9JDV5 145 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 WNT9BO14905 357 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 TNFSF12O43508 249 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 SCO1O75880 301 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 IGLV2-14P01704 120 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 PSG2P11465 335 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 SELENOVP59797 346 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 POLR2GP62487 172 aaKnown RBP eCLIP11.75□□□□□ -0.53
LDB3-204ENST00000372066 CATR1Q13166 79 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 BTNL8Q6UX41 500 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 TMEM252Q8N6L7 170 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 OR2Z1Q8NG97 314 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 RNASE11Q8TAA1 199 aaKnown RBP11.75□□□□□ -0.53
LDB3-204ENST00000372066 COQ2Q96H96 371 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 NARS2Q96I59 477 aaKnown RBP11.75□□□□□ -0.53
LDB3-204ENST00000372066 NCOR1P1Q9H4R4 102 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 ELOVL5Q9NYP7 299 aa11.75□□□□□ -0.53
LDB3-204ENST00000372066 FAM90A26D6RGX4 464 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 TRIM77I1YAP6 450 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 SSSCA1O60232 199 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 FBXO24O75426 580 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 APOC3P02656 99 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 ADH4P08319 380 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 DANCRP0C864 163 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 LPAR6P43657 344 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 GATA4P43694 442 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 GABRA2P47869 451 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 CEBPDP49716 269 aaPredicted RBP11.74□□□□□ -0.53
LDB3-204ENST00000372066 RPL23AP62750 156 aaKnown RBP11.74□□□□□ -0.53
LDB3-204ENST00000372066 HTD2P86397 168 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 COL10A1Q03692 680 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 KRBOX4Q5JUW0 171 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 C10orf91Q5T1B1 145 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 Q6ZRG5 221 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 KRTAP1-3Q8IUG1 177 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 PRR18Q8N4B5 295 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms