RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 DUXBA0A1W2PPF3 345 aa21.67■■□□□ 1.06
ATPAF1-202ENST00000371937 SERPINE2P07093 398 aa21.67■■□□□ 1.06
ATPAF1-202ENST00000371937 GPR12P47775 334 aa21.67■■□□□ 1.06
ATPAF1-202ENST00000371937 RAB39BQ96DA2 213 aa21.67■■□□□ 1.06
ATPAF1-202ENST00000371937 ABHD14BQ96IU4 210 aa21.67■■□□□ 1.06
ATPAF1-202ENST00000371937 FAM208BQ5VWN6 2430 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 CATR1Q13166 79 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 IAH1Q2TAA2 248 aaPredicted RBP21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 PRAMEF5Q5TYX0 476 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 C9orf62Q8N4C0 152 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 SLC35G3Q8N808 338 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 GRPEL2Q8TAA5 225 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 RBPMSQ93062 196 aaKnown RBP21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 ABHD14AQ9BUJ0 271 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 SDHAF2Q9NX18 166 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 HSPB11Q9Y547 144 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 CHD6Q8TD26 2715 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 HMSDA8MTL9 139 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 NDUFS7O75251 213 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 COX6B1P14854 86 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 GPR6P46095 362 aaPredicted RBP21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 LAMTOR1Q6IAA8 161 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 ZNF66Q6ZN08 573 aa21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 SELENOHQ8IZQ5 122 aaKnown RBP21.66■■□□□ 1.06
ATPAF1-202ENST00000371937 CCL3L1P16619 93 aa21.65■■□□□ 1.06
ATPAF1-202ENST00000371937 PSMB6P28072 239 aa21.65■■□□□ 1.06
ATPAF1-202ENST00000371937 ZNF134P52741 427 aa21.65■■□□□ 1.06
ATPAF1-202ENST00000371937 EIF4EBP1Q13541 118 aaPredicted RBP21.65■■□□□ 1.06
ATPAF1-202ENST00000371937 LRRC37A5PQ49AS3 106 aa21.65■■□□□ 1.06
ATPAF1-202ENST00000371937 IGFBPL1Q8WX77 278 aa21.65■■□□□ 1.06
ATPAF1-202ENST00000371937 HSD17B10Q99714 261 aaKnown RBP21.65■■□□□ 1.06
ATPAF1-202ENST00000371937 GSKIPQ9P0R6 139 aa21.65■■□□□ 1.06
ATPAF1-202ENST00000371937 TRAV14DV4A0A0A6YYC5 116 aa21.64■■□□□ 1.06
ATPAF1-202ENST00000371937 ZNF16P17020 682 aaPredicted RBP21.64■■□□□ 1.06
ATPAF1-202ENST00000371937 SP5Q6BEB4 398 aaPredicted RBP21.64■■□□□ 1.06
ATPAF1-202ENST00000371937 CCL19Q99731 98 aa21.64■■□□□ 1.06
ATPAF1-202ENST00000371937 GAB2Q9UQC2 676 aa21.64■■□□□ 1.06
ATPAF1-202ENST00000371937 DCHS2Q6V1P9 2916 aa21.64■■□□□ 1.06
ATPAF1-202ENST00000371937 USF3Q68DE3 2245 aa21.64■■□□□ 1.06
ATPAF1-202ENST00000371937 FXYD6-FXYD2A0A087WZ82 144 aa21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 A0A1W2PPH5 198 aa21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 MMP23AO75900 390 aa21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 CLDN1O95832 211 aa21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 CT45A1Q5HYN5 189 aa21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 WDR25Q64LD2 544 aaPredicted RBP21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 C11orf87Q6NUJ2 197 aa21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 TCTEX1D1Q8N7M0 179 aa21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 CT45A3Q8NHU0 189 aa21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 THAP6Q8TBB0 222 aa21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 C5orf30Q96GV9 206 aa21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 IFI27L2Q9H2X8 130 aa21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 BOLA1Q9Y3E2 137 aa21.64■■□□□ 1.05
ATPAF1-202ENST00000371937 MPC2O95563 127 aa21.63■■□□□ 1.05
ATPAF1-202ENST00000371937 IGHV3-7P01780 117 aa21.63■■□□□ 1.05
ATPAF1-202ENST00000371937 SLC25A4P12235 298 aa21.63■■□□□ 1.05
ATPAF1-202ENST00000371937 Q3ZCU0 254 aa21.63■■□□□ 1.05
ATPAF1-202ENST00000371937 ZNF439Q8NDP4 499 aa21.63■■□□□ 1.05
ATPAF1-202ENST00000371937 LEAP2Q969E1 77 aa21.63■■□□□ 1.05
ATPAF1-202ENST00000371937 PATZ1Q9HBE1 687 aaKnown RBP21.63■■□□□ 1.05
ATPAF1-202ENST00000371937 PLSCR3Q9NRY6 295 aa21.63■■□□□ 1.05
ATPAF1-202ENST00000371937 VDAC1P21796 283 aa21.62■■□□□ 1.05
ATPAF1-202ENST00000371937 IL15RAQ13261 267 aa21.62■■□□□ 1.05
ATPAF1-202ENST00000371937 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.62■■□□□ 1.05
ATPAF1-202ENST00000371937 FAM212BQ9NTI7 297 aaPredicted RBP21.62■■□□□ 1.05
ATPAF1-202ENST00000371937 LRRK2Q5S007 2527 aa21.62■■□□□ 1.05
ATPAF1-202ENST00000371937 RPA2P15927 270 aa21.62■■□□□ 1.05
ATPAF1-202ENST00000371937 DLX6P56179 175 aa21.62■■□□□ 1.05
ATPAF1-202ENST00000371937 LGALSLQ3ZCW2 172 aaPredicted RBP21.62■■□□□ 1.05
ATPAF1-202ENST00000371937 TMEM65Q6PI78 240 aa21.62■■□□□ 1.05
ATPAF1-202ENST00000371937 BTNL3Q6UXE8 466 aa21.62■■□□□ 1.05
ATPAF1-202ENST00000371937 SPIN2AQ99865 258 aa21.62■■□□□ 1.05
ATPAF1-202ENST00000371937 SPIN2BQ9BPZ2 258 aa21.62■■□□□ 1.05
ATPAF1-202ENST00000371937 A1L4Q6 167 aa21.61■■□□□ 1.05
ATPAF1-202ENST00000371937 RAB29O14966 203 aa21.61■■□□□ 1.05
ATPAF1-202ENST00000371937 PET100P0DJ07 73 aa21.61■■□□□ 1.05
ATPAF1-202ENST00000371937 ESCO2Q56NI9 601 aa21.61■■□□□ 1.05
ATPAF1-202ENST00000371937 ZBTB8BQ8NAP8 495 aaPredicted RBP21.61■■□□□ 1.05
ATPAF1-202ENST00000371937 C8orf46Q8TAG6 207 aa21.61■■□□□ 1.05
ATPAF1-202ENST00000371937 TCTEX1D2Q8WW35 142 aa21.61■■□□□ 1.05
ATPAF1-202ENST00000371937 YLPM1P49750 1951 aaKnown RBP21.6■■□□□ 1.05
ATPAF1-202ENST00000371937 CLEC18AA5D8T8 446 aa21.6■■□□□ 1.05
ATPAF1-202ENST00000371937 SLC31A2O15432 143 aa21.6■■□□□ 1.05
ATPAF1-202ENST00000371937 ARPC5O15511 151 aa21.6■■□□□ 1.05
ATPAF1-202ENST00000371937 UTF1Q5T230 341 aa21.6■■□□□ 1.05
ATPAF1-202ENST00000371937 SLC25A48Q6ZT89 311 aaKnown RBP21.6■■□□□ 1.05
ATPAF1-202ENST00000371937 ZNF546Q86UE3 836 aa21.6■■□□□ 1.05
ATPAF1-202ENST00000371937 CLEC18CQ8NCF0 446 aa21.6■■□□□ 1.05
ATPAF1-202ENST00000371937 GNB2P62879 340 aa21.59■■□□□ 1.05
ATPAF1-202ENST00000371937 RPL30P62888 115 aaKnown RBP21.59■■□□□ 1.05
ATPAF1-202ENST00000371937 ZNF585BQ52M93 769 aa21.59■■□□□ 1.05
ATPAF1-202ENST00000371937 F5H0A9 414 aaPredicted RBP21.59■■□□□ 1.05
ATPAF1-202ENST00000371937 C4BPBP20851 252 aa21.59■■□□□ 1.05
ATPAF1-202ENST00000371937 GNG10P50151 68 aa21.59■■□□□ 1.05
ATPAF1-202ENST00000371937 DOCK11Q5JSL3 2073 aa21.58■■□□□ 1.05
ATPAF1-202ENST00000371937 PPIAL4CA0A0B4J2A2 164 aa21.58■■□□□ 1.05
ATPAF1-202ENST00000371937 A0A1W2PPE3 182 aa21.58■■□□□ 1.05
ATPAF1-202ENST00000371937 C17orf98A8MV24 154 aa21.58■■□□□ 1.05
ATPAF1-202ENST00000371937 PPIAL4GP0DN37 164 aa21.58■■□□□ 1.05
ATPAF1-202ENST00000371937 DUTP33316 252 aaKnown RBP21.58■■□□□ 1.05
ATPAF1-202ENST00000371937 NMSQ5H8A3 153 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms