RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CXCL12P48061 93 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 PXNP49023 591 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-201ENST00000371817 PAQR9Q6ZVX9 377 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-201ENST00000371817 LRRC29Q8WV35 223 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 DEFB127Q9H1M4 99 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 METTL12A8MUP2 240 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 FFAR1O14842 300 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 ZNF774Q6NX45 483 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 ZNF764Q96H86 408 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-201ENST00000371817 ABHD14BQ96IU4 210 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 GDF9O60383 454 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 IGHV3-13P01766 116 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 IGHV3-7P01780 117 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 CACNG7P62955 275 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 FOXF1Q12946 379 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 SRSF5Q13243 272 aaKnown RBP13.38□□□□□ -0.27
COL5A1-201ENST00000371817 NCOR1P1Q9H4R4 102 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 S1PR2O95136 353 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 SDHCQ99643 169 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-201ENST00000371817 PCOLCE2Q9UKZ9 415 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 ANK1P16157 1881 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 PPIAL4DF5H284 164 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 H3BUT2 72 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 CDX4O14627 284 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-201ENST00000371817 RND3P61587 244 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 RNPS1Q15287 305 aaKnown RBP13.37□□□□□ -0.27
COL5A1-201ENST00000371817 FADS6Q8N9I5 356 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 OR1L8Q8NGR8 309 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 SOSTQ9BQB4 213 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 ITGB4P16144 1822 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 LINC00614P0C842 121 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 KRTCAP3Q53RY4 240 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 OR8G5Q8NG78 346 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 TMEM101Q96IK0 257 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 SARGQ9BW04 601 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 ARHGAP21Q5T5U3 1957 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 F11P03951 625 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 HBBP68871 147 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 IFITM3Q01628 133 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 PRICKLE4Q2TBC4 344 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 ZNF257Q9Y2Q1 563 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 VSIG10L2P0DP72 767 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 OR2K2Q8NGT1 345 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 OR2A4O95047 310 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 FGF5P12034 268 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 NUBP1P53384 320 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 OR2A7Q96R45 310 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 DYSFO75923 2080 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 TOX2Q96NM4 488 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 KIR2DL4Q99706 377 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 CCL28Q9NRJ3 127 aa13.37□□□□□ -0.27
COL5A1-201ENST00000371817 COL2A1P02458 1487 aaPredicted RBP13.36□□□□□ -0.27
COL5A1-201ENST00000371817 KCPQ6ZWJ8 1503 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 MEX3AA1L020 520 aaKnown RBP13.36□□□□□ -0.27
COL5A1-201ENST00000371817 TMEM78Q5T7P6 136 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 MBNL2Q5VZF2 373 aaKnown RBP13.36□□□□□ -0.27
COL5A1-201ENST00000371817 SLC23A3Q6PIS1 610 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 MRGPRX3Q96LB0 322 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 TRAV8-4A0A0B4J246 113 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 HIKESHIQ53FT3 197 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 ALKAL1Q6UXT8 129 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 PLCH1Q4KWH8 1693 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 LPAL2Q16609 132 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 PAPPA-AS1Q5QFB9 102 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 PGLYRP3Q96LB9 341 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 KLK15Q9H2R5 256 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 J3QR06 171 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 FXYD3Q14802 87 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 VAX1Q5SQQ9 334 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 HARBI1Q96MB7 349 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 DSPPQ9NZW4 1301 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 A0A1B0GTL3 188 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 EML2O95834 649 aa13.36□□□□□ -0.27
COL5A1-201ENST00000371817 MRPS11P82912 194 aaKnown RBP13.36□□□□□ -0.27
COL5A1-201ENST00000371817 HYPMO75409 117 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 TIMM23BQ5SRD1 257 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 GALNT14Q96FL9 552 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 RNF122Q9H9V4 155 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 PLXNB1O43157 2135 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 TGIF1Q15583 401 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 SPSB4Q96A44 273 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 SARAFQ96BY9 339 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 SYNGR1O43759 233 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 OR4A8P0C604 315 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 CTLA4P16410 223 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 ID1P41134 155 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 NT5CQ8TCD5 201 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 PPP1R3EQ9H7J1 279 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 OR51B2Q9Y5P1 312 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 LRP6O75581 1613 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 FTH1P19P0C7X4 201 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 WDR54Q9H977 334 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 SS18L1O75177 396 aaPredicted RBP13.35□□□□□ -0.27
COL5A1-201ENST00000371817 PRSS23O95084 383 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 LCN2P80188 198 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 ASAH2BP0C7U1 165 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 HOXA5P20719 270 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms