RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 FAM131AQ6UXB0 335 aa11.71□□□□□ -0.53
SSR4-204ENST00000370087 LINC00322Q6ZN03 302 aaPredicted RBP11.71□□□□□ -0.53
SSR4-204ENST00000370087 GAPTQ8N292 157 aa11.71□□□□□ -0.53
SSR4-204ENST00000370087 ABHD5Q8WTS1 349 aa11.71□□□□□ -0.53
SSR4-204ENST00000370087 TUBA4BQ9H853 241 aa11.71□□□□□ -0.53
SSR4-204ENST00000370087 OR2S2Q9NQN1 319 aa11.71□□□□□ -0.53
SSR4-204ENST00000370087 ETAA1Q9NY74 926 aa11.71□□□□□ -0.53
SSR4-204ENST00000370087 BLOC1S6Q9UL45 172 aa11.71□□□□□ -0.53
SSR4-204ENST00000370087 TPRKBQ9Y3C4 175 aa11.71□□□□□ -0.53
SSR4-204ENST00000370087 CSTBP04080 98 aaKnown RBP11.7□□□□□ -0.54
SSR4-204ENST00000370087 GTF2A1P52655 376 aaPredicted RBP11.7□□□□□ -0.54
SSR4-204ENST00000370087 TMEM30BQ3MIR4 351 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 SLC22A6Q4U2R8 563 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 ACTBL2Q562R1 376 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 C6orf183Q5T699 404 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 CD200R1LQ6Q8B3 271 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 UNQ5815/PRO19632Q6UWF5 114 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 PPP1R27Q86WC6 154 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 TCTEX1D1Q8N7M0 179 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 GGHQ92820 318 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 CNBD2Q96M20 576 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 PLEKHA3Q9HB20 300 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 TAF9BQ9HBM6 251 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 PSORS1C1Q9UIG5 152 aa11.7□□□□□ -0.54
SSR4-204ENST00000370087 KIAA1109Q2LD37 5005 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 RRHO14718 337 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 MYL12BO14950 172 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 BRI3O95415 125 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 ZNF93P35789 620 aaPredicted RBP11.69□□□□□ -0.54
SSR4-204ENST00000370087 DEFA5Q01523 94 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 STEAP3Q658P3 488 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 XAF1Q6GPH4 301 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 PYHIN1Q6K0P9 492 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 AHSA2Q719I0 299 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 LFNGQ8NES3 379 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 IL17DQ8TAD2 202 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 CLCC1Q96S66 551 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 IFI27L2Q9H2X8 130 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 ERGIC3Q9Y282 383 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 CEPT1Q9Y6K0 416 aa11.69□□□□□ -0.54
SSR4-204ENST00000370087 ANKRD34BA5PLL1 514 aa11.68□□□□□ -0.54
SSR4-204ENST00000370087 PTGES3LE9PB15 166 aa11.68□□□□□ -0.54
SSR4-204ENST00000370087 TRGV3P03979 118 aa11.68□□□□□ -0.54
SSR4-204ENST00000370087 SYNJ2BPP57105 145 aa11.68□□□□□ -0.54
SSR4-204ENST00000370087 KLF5Q13887 457 aaPredicted RBP11.68□□□□□ -0.54
SSR4-204ENST00000370087 CCDC58Q4VC31 144 aa11.68□□□□□ -0.54
SSR4-204ENST00000370087 RNLSQ5VYX0 342 aa11.68□□□□□ -0.54
SSR4-204ENST00000370087 RAB12Q6IQ22 244 aa11.68□□□□□ -0.54
SSR4-204ENST00000370087 GLDNQ6ZMI3 551 aaPredicted RBP11.68□□□□□ -0.54
SSR4-204ENST00000370087 OR9G4Q8NGQ1 327 aa11.68□□□□□ -0.54
SSR4-204ENST00000370087 WFDC10AQ9H1F0 79 aa11.68□□□□□ -0.54
SSR4-204ENST00000370087 MCRIP1C9JLW8 97 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 SC5DO75845 299 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 LY6G6CO95867 125 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 TRBV12-3P01733 135 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 CSN3P07498 182 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 LIMS3P0CW19 117 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 LIMS4P0CW20 117 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 GTF2F2P13984 249 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 ETV1P50549 477 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 TAS2R43P59537 309 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 PLGLAQ15195 96 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 AKIRIN2Q53H80 203 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 RBM48Q5RL73 367 aaKnown RBP11.67□□□□□ -0.54
SSR4-204ENST00000370087 GTSCR1Q86UQ5 136 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 OR13C5Q8NGS8 318 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 MRPL30Q8TCC3 161 aaKnown RBP11.67□□□□□ -0.54
SSR4-204ENST00000370087 TMEM106AQ96A25 262 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 MRPS24Q96EL2 167 aaKnown RBP11.67□□□□□ -0.54
SSR4-204ENST00000370087 TMEM138Q9NPI0 162 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 MBNL3Q9NUK0 354 aaKnown RBP11.67□□□□□ -0.54
SSR4-204ENST00000370087 BABAM2Q9NXR7 383 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 JPT1Q9UK76 154 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 RYR1P21817 5038 aa11.67□□□□□ -0.54
SSR4-204ENST00000370087 VPS13DQ5THJ4 4388 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 UBE2QL1A1L167 161 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 H0Y980 276 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 ARPC1BO15143 372 aaKnown RBP11.66□□□□□ -0.54
SSR4-204ENST00000370087 ST8SIA5O15466 376 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 CA2P00918 260 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 CDK1P06493 297 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 CT45A6P0DMU7 189 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 CT45A5P0DMU8 189 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 CT45A7P0DMV0 189 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 ZP3P21754 424 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 RPL39P5Q59GN2 51 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 SIGIRRQ6IA17 410 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 RPL22L1Q6P5R6 122 aaKnown RBP11.66□□□□□ -0.54
SSR4-204ENST00000370087 TRAT1Q6PIZ9 186 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 MND1Q9BWT6 205 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 PARP12Q9H0J9 701 aaKnown RBP11.66□□□□□ -0.54
SSR4-204ENST00000370087 BANF2Q9H503 90 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 SLA2Q9H6Q3 261 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 RANGRFQ9HD47 186 aaPredicted RBP11.66□□□□□ -0.54
SSR4-204ENST00000370087 RAB9BQ9NP90 201 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 FKBP14Q9NWM8 211 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 PEX16Q9Y5Y5 336 aa11.66□□□□□ -0.54
SSR4-204ENST00000370087 SHISA3A0PJX4 238 aa11.65□□□□□ -0.54
SSR4-204ENST00000370087 H0YJW9 148 aa11.65□□□□□ -0.54
SSR4-204ENST00000370087 DENRO43583 198 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms