RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 FAM185AQ8N0U4 392 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 RNF126Q9BV68 326 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 RAB1BQ9H0U4 201 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 GNG12Q9UBI6 72 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 KAAG1Q9UBP8 84 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 KCNIP3Q9Y2W7 256 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 HELZ2Q9BYK8 2649 aaKnown RBP11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 TRGV10A0A0A0MS01 117 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 A0A0G2JRQ6 117 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 ARPC5O15511 151 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 UCP1P25874 307 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 DLX1P56177 255 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 RPL31P62899 125 aaKnown RBP11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 ZNF585BQ52M93 769 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 ZNF645Q8N7E2 425 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 H1FXQ92522 213 aaKnown RBP11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 CORO2AQ92828 525 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 TMEM56Q96MV1 263 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 IFI27L2Q9H2X8 130 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 HEXA-AS1Q9H8Q6 139 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 SDHAF2Q9NX18 166 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 TMEM56-RWDD3S4R434 201 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 ABCA12Q86UK0 2595 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 CELSR1Q9NYQ6 3014 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 H0Y980 276 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 RGS11O94810 467 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 MPC2O95563 127 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 IZUMO4Q1ZYL8 232 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 OR2B11Q5JQS5 317 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 CMTM1Q8IZ96 169 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 OR52M1Q8NGK5 317 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 NINJ1Q92982 152 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 NMES1Q9C002 83 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 LINC00574Q9H8X3 128 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 GFOD1Q9NXC2 390 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 OR5AC2Q9NZP5 309 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 GSKIPQ9P0R6 139 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 MBD2Q9UBB5 411 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 JPT1Q9UK76 154 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 UBE2J1Q9Y385 318 aaPredicted RBP11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 LINC00473A8K010 186 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 NDUFB3O43676 98 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 RAMP3O60896 148 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 CDS2O95674 445 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 CLDN1O95832 211 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 NFYBP25208 207 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 RAB32Q13637 225 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 IAH1Q2TAA2 248 aaPredicted RBP11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 RPL39P5Q59GN2 51 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 CT45A1Q5HYN5 189 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 ZNF439Q8NDP4 499 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 CT45A3Q8NHU0 189 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 C2orf50Q96LR7 162 aa11.6□□□□□ -0.55
HMGCS2-201ENST00000369406 ZNF16P17020 682 aaPredicted RBP11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 DLX6P56179 175 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 PRB3Q04118 309 aaPredicted RBP11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 Q3ZCU0 254 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 LGI3Q8N145 548 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 RRNAD1Q96FB5 475 aaKnown RBP11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 NARFLQ9H6Q4 476 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 PLEKHF2Q9H8W4 249 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 LINC00312Q9Y6C7 94 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 WNK2Q9Y3S1 2297 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 YPEL1O60688 119 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 C11orf87Q6NUJ2 197 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 ODF3L1Q8IXM7 274 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 IGFBPL1Q8WX77 278 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 AKR1E2Q96JD6 320 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 YPEL2Q96QA6 119 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 CITED4Q96RK1 184 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 IDI2-AS1Q9NZ38 188 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 PTPN13Q12923 2485 aa11.59□□□□□ -0.55
HMGCS2-201ENST00000369406 ANKRD17O75179 2603 aaKnown RBP11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 TET2Q6N021 2002 aaPredicted RBP11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 A1L4Q6 167 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 RNF222A6NCQ9 220 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 ZNF729A6NN14 1252 aaPredicted RBP11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 C17orf98A8MV24 154 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 PPIHO43447 177 aaKnown RBP11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 TSC22D2O75157 780 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 GNG10P50151 68 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 LRRC10Q5BKY1 277 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 CCDC28AQ8IWP9 274 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 C11orf42Q8N5U0 333 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 ASB13Q8WXK3 278 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 CSMD1Q96PZ7 3565 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 hADV38S2A0JD32 116 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 PSMB6P28072 239 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 NMSQ5H8A3 153 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 FOXRED2Q8IWF2 684 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 SLA2Q9H6Q3 261 aa11.58□□□□□ -0.56
HMGCS2-201ENST00000369406 HMSDA8MTL9 139 aa11.57□□□□□ -0.56
HMGCS2-201ENST00000369406 IGKV1-5P01602 117 aa11.57□□□□□ -0.56
HMGCS2-201ENST00000369406 WNT2P09544 360 aa11.57□□□□□ -0.56
HMGCS2-201ENST00000369406 RPA2P15927 270 aa11.57□□□□□ -0.56
HMGCS2-201ENST00000369406 AP2S1P53680 142 aaPredicted RBP11.57□□□□□ -0.56
HMGCS2-201ENST00000369406 Q6ZRM9 215 aa11.57□□□□□ -0.56
HMGCS2-201ENST00000369406 NEU4Q8WWR8 484 aaPredicted RBP11.57□□□□□ -0.56
HMGCS2-201ENST00000369406 RPUSD1Q9UJJ7 312 aaKnown RBP11.57□□□□□ -0.56
HMGCS2-201ENST00000369406 TNFSF18Q9UNG2 199 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms