RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 Q3ZCU0 254 aa12.12□□□□□ -0.47
SMPDL3A-201ENST00000368440 NRARPQ7Z6K4 114 aa12.12□□□□□ -0.47
SMPDL3A-201ENST00000368440 RPEQ96AT9 228 aa12.12□□□□□ -0.47
SMPDL3A-201ENST00000368440 CREB3L1Q96BA8 519 aa12.12□□□□□ -0.47
SMPDL3A-201ENST00000368440 OCSTAMPQ9BR26 566 aa12.12□□□□□ -0.47
SMPDL3A-201ENST00000368440 PARP12Q9H0J9 701 aaKnown RBP12.12□□□□□ -0.47
SMPDL3A-201ENST00000368440 OR1A1Q9P1Q5 309 aa12.12□□□□□ -0.47
SMPDL3A-201ENST00000368440 A0A1W2PPI3 338 aa12.11□□□□□ -0.47
SMPDL3A-201ENST00000368440 A6NDX4 124 aa12.11□□□□□ -0.47
SMPDL3A-201ENST00000368440 REG1BP48304 166 aa12.11□□□□□ -0.47
SMPDL3A-201ENST00000368440 HERPUD1Q15011 391 aa12.11□□□□□ -0.47
SMPDL3A-201ENST00000368440 Q6ZNX1 250 aa12.11□□□□□ -0.47
SMPDL3A-201ENST00000368440 TOMM5Q8N4H5 51 aa12.11□□□□□ -0.47
SMPDL3A-201ENST00000368440 NUDCD2Q8WVJ2 157 aa12.11□□□□□ -0.47
SMPDL3A-201ENST00000368440 IGKV1D-8A0A087WSZ0 117 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 GABARAPH6UMI1 98 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 HSD17B6O14756 317 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 CTDSPLO15194 276 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 YPEL1O60688 119 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 SCGNO76038 276 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 PTTG1O95997 202 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 CRYBA1P05813 215 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 MDKP21741 143 aaPredicted RBP12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 RFX2P48378 723 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 ASAH1Q13510 395 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 AWAT1Q58HT5 328 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 HACD4Q5VWC8 232 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 DHRS7BQ6IAN0 325 aaPredicted RBP12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 CFHR4Q92496 578 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 ST6GALNAC6Q969X2 333 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 YPEL2Q96QA6 119 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 SLC23A1Q9UHI7 598 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 MGAT4AQ9UM21 535 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 POM121CA8CG34 1229 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 OOSP1A8MZH6 123 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 TRDCB7Z8K6 153 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 TIMM23O14925 209 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 LYRM1O43325 122 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 GSTZ1O43708 216 aaPredicted RBP12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 SSX5O60225 188 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 GSTP1P09211 210 aaKnown RBP12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 PRSS3P35030 304 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 COMPP49747 757 aaPredicted RBP12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 RAG2P55895 527 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 RPL15P61313 204 aaKnown RBP12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 Q6ZSV7 163 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 SPATA3Q8NHX4 192 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 RBMXL1Q96E39 390 aaKnown RBP12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 ABHD14AQ9BUJ0 271 aa12.1□□□□□ -0.47
SMPDL3A-201ENST00000368440 STAB1Q9NY15 2570 aa12.09□□□□□ -0.47
SMPDL3A-201ENST00000368440 GSTT2P0CG29 244 aa12.09□□□□□ -0.47
SMPDL3A-201ENST00000368440 GSTT2BP0CG30 244 aa12.09□□□□□ -0.47
SMPDL3A-201ENST00000368440 ZNF816Q0VGE8 651 aaPredicted RBP12.09□□□□□ -0.47
SMPDL3A-201ENST00000368440 ARL6IP1Q15041 203 aa12.09□□□□□ -0.47
SMPDL3A-201ENST00000368440 IGSF11Q5DX21 431 aa12.09□□□□□ -0.47
SMPDL3A-201ENST00000368440 ODF3L1Q8IXM7 274 aa12.09□□□□□ -0.47
SMPDL3A-201ENST00000368440 LYG1Q8N1E2 194 aa12.09□□□□□ -0.47
SMPDL3A-201ENST00000368440 DRAM1Q8N682 238 aa12.09□□□□□ -0.47
SMPDL3A-201ENST00000368440 OR56B4Q8NH76 319 aa12.09□□□□□ -0.47
SMPDL3A-201ENST00000368440 RABL2AQ9UBK7 228 aaPredicted RBP12.09□□□□□ -0.47
SMPDL3A-201ENST00000368440 RABL2BQ9UNT1 228 aa12.09□□□□□ -0.47
SMPDL3A-201ENST00000368440 ST8SIA5O15466 376 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 FABP7O15540 132 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 NDUFA7O95182 113 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 BRS3P32247 399 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 RAB7AP51149 207 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 ZNF137PP52743 207 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 GNG2P59768 71 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 FOXL1Q12952 345 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 LY6G6FQ5SQ64 297 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 CCDC144NLQ6NUI1 221 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 MZT2BQ6NZ67 158 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 MINDY2Q8NBR6 621 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 ENKURQ8TC29 256 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 C15orf40Q8WUR7 153 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 RTN4IP1Q8WWV3 396 aaPredicted RBP12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 IFI27L2Q9H2X8 130 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 A0A0A6YYH2 397 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 IGHV1-3A0A0C4DH29 117 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 A6NJ64 397 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 RGS11O94810 467 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 DTYMKP23919 212 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 CEACAM6P40199 344 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 MRPS10P82664 201 aaKnown RBP12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 PNLIPRP3Q17RR3 467 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 FAAP20Q6NZ36 180 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 C12orf54Q6X4T0 127 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 OR8H3Q8N146 312 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 OR2AK2Q8NG84 335 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 OR4A4PQ8NGN8 299 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 CABLES2Q9BTV7 478 aa12.08□□□□□ -0.48
SMPDL3A-201ENST00000368440 IGHV3-72A0A0B4J1Y9 119 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 FAM90A9PA6NNJ1 464 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 BET1O15155 118 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 HSPA12AO43301 675 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 RBBP9O75884 186 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 GAPDHP04406 335 aaKnown RBP12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 SNRNP70P08621 437 aaKnown RBP12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 ZBTB25P24278 435 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 IL3RAP26951 378 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms