RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 PHYHIPQ92561 330 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 TPSG1Q9NRR2 321 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 STEAP1Q9UHE8 339 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 SLC23A1Q9UHI7 598 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 ERGIC3Q9Y282 383 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 STAB2Q8WWQ8 2551 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 C3orf84H3BNL1 204 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 ITGB1BP1O14713 200 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 RRHO14718 337 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 ST8SIA5O15466 376 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 CT45A6P0DMU7 189 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 CT45A5P0DMU8 189 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 CT45A7P0DMV0 189 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 EGR2P11161 476 aaPredicted RBP12.39□□□□□ -0.43
CKS1B-202ENST00000368436 CX3CL1P78423 397 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 UNC119Q13432 240 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 FAM27D1Q5T7N8 215 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 RNLSQ5VYX0 342 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 GLT8D1Q68CQ7 371 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 TCTEX1D1Q8N7M0 179 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 BPIFB6Q8NFQ5 453 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 KCNG3Q8TAE7 436 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 IL1F10Q8WWZ1 152 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 DLX4Q92988 240 aaPredicted RBP12.39□□□□□ -0.43
CKS1B-202ENST00000368436 TMEM59Q9BXS4 323 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 TOLLIPQ9H0E2 274 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 ALX4Q9H161 411 aaPredicted RBP12.39□□□□□ -0.43
CKS1B-202ENST00000368436 GHITMQ9H3K2 345 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 ISYNA1Q9NPH2 558 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 FOXA2Q9Y261 457 aaPredicted RBP12.39□□□□□ -0.43
CKS1B-202ENST00000368436 NUBP2Q9Y5Y2 271 aa12.39□□□□□ -0.43
CKS1B-202ENST00000368436 TRBV6-6A0A0A6YYG2 114 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 A0A1W2PN81 502 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 OR5H14A6NHG9 310 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 TMEM14DPA8MWL7 114 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 FCN1O00602 326 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 LY86O95711 162 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 MC5RP33032 325 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 CHRNA7P36544 502 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 QRFPP83859 136 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 ECSCRQ19T08 205 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 RPL39P5Q59GN2 51 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 CD200R1LQ6Q8B3 271 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 OR5AN1Q8NGI8 311 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 AGMATQ9BSE5 352 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 NICN1Q9BSH3 213 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 FBXL15Q9H469 300 aa12.38□□□□□ -0.43
CKS1B-202ENST00000368436 LINC01619G3V211 115 aa12.37□□□□□ -0.43
CKS1B-202ENST00000368436 H0YJW9 148 aa12.37□□□□□ -0.43
CKS1B-202ENST00000368436 SLC22A1O15245 554 aa12.37□□□□□ -0.43
CKS1B-202ENST00000368436 LGALS1P09382 135 aaKnown RBP12.37□□□□□ -0.43
CKS1B-202ENST00000368436 SRMP19623 302 aa12.37□□□□□ -0.43
CKS1B-202ENST00000368436 SLURP1P55000 103 aa12.37□□□□□ -0.43
CKS1B-202ENST00000368436 GABPB1Q06547 395 aaPredicted RBP12.37□□□□□ -0.43
CKS1B-202ENST00000368436 MOB1BQ7L9L4 216 aa12.37□□□□□ -0.43
CKS1B-202ENST00000368436 RNF5Q99942 180 aa12.37□□□□□ -0.43
CKS1B-202ENST00000368436 PARP12Q9H0J9 701 aaKnown RBP12.37□□□□□ -0.43
CKS1B-202ENST00000368436 RIMS4Q9H426 269 aaPredicted RBP12.37□□□□□ -0.43
CKS1B-202ENST00000368436 KCNK15Q9H427 330 aa12.37□□□□□ -0.43
CKS1B-202ENST00000368436 WASHC3Q9Y3C0 194 aa12.37□□□□□ -0.43
CKS1B-202ENST00000368436 A0A0A6YYD4 124 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 SAP30O75446 220 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 RBBP9O75884 186 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 CDK1P06493 297 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 SPNP16150 400 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 TMEM267Q0VDI3 215 aaPredicted RBP12.36□□□□□ -0.43
CKS1B-202ENST00000368436 AKIRIN2Q53H80 203 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 RBM48Q5RL73 367 aaKnown RBP12.36□□□□□ -0.43
CKS1B-202ENST00000368436 OGFRL1Q5TC84 451 aaPredicted RBP12.36□□□□□ -0.43
CKS1B-202ENST00000368436 PYHIN1Q6K0P9 492 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 ACSM6Q6P461 480 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 GLDNQ6ZMI3 551 aaPredicted RBP12.36□□□□□ -0.43
CKS1B-202ENST00000368436 SBSPONQ8IVN8 264 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 SETD6Q8TBK2 473 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 CASTOR1Q8WTX7 329 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 ABHD14BQ96IU4 210 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 TMED9Q9BVK6 235 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 MND1Q9BWT6 205 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 LPAR5Q9H1C0 372 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 CHMP1AQ9HD42 196 aaPredicted RBP12.36□□□□□ -0.43
CKS1B-202ENST00000368436 PLEKHJ1Q9NW61 149 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 RNF150Q9ULK6 438 aa12.36□□□□□ -0.43
CKS1B-202ENST00000368436 LSM2Q9Y333 95 aaKnown RBP12.36□□□□□ -0.43
CKS1B-202ENST00000368436 IGHV4OR15-8A0A075B7B6 117 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 A0A087WW49 117 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 PROP1O75360 226 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 BPNT1O95861 308 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 GSTP1P09211 210 aaKnown RBP12.35□□□□□ -0.43
CKS1B-202ENST00000368436 RCN1Q15293 331 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 HSD17B12Q53GQ0 312 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 ZNF562Q6V9R5 426 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 CEACAM19Q7Z692 300 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 PPP1R27Q86WC6 154 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 FAM89BQ8N5H3 189 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 OR6M1Q8NGM8 313 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 PTX4Q96A99 478 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 C11orf54Q9H0W9 315 aaPredicted RBP12.35□□□□□ -0.43
CKS1B-202ENST00000368436 AK3Q9UIJ7 227 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 GAB2Q9UQC2 676 aa12.35□□□□□ -0.43
CKS1B-202ENST00000368436 FOXI3A8MTJ6 420 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms