RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 WDR31Q8NA23 367 aa15.21■□□□□ 0.02
UBQLN4-201ENST00000368309 METRNQ9UJH8 293 aa15.21■□□□□ 0.02
UBQLN4-201ENST00000368309 TMEM30CPA0ZSE6 113 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 C5orf52A6NGY3 159 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 MEOX2P50222 304 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 URGCP-MRPS24S4R325 110 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 CADP27708 2225 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 SPAARA0A1B0GVQ0 90 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 TIMM8AO60220 97 aaPredicted RBP15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 HBZP02008 142 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 IFNA4P05014 189 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 RAB2AP61019 212 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 DLK1P80370 383 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 ZNF506Q5JVG8 444 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 C5orf30Q96GV9 206 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 OR4C12Q96R67 309 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 ZNF665Q9H7R5 613 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 IGHV3-43A0A0B4J1X8 118 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 PIGBOS1A0A0B4J2F0 54 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 ACAA1P09110 424 aaPredicted RBP15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 IGHV3-43DP0DP04 118 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 RPS16P62249 146 aaKnown RBP15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 SSX7Q7RTT5 188 aa15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 RBMXL1Q96E39 390 aaKnown RBP15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 UNKLQ9H9P5 680 aaKnown RBP15.2■□□□□ 0.02
UBQLN4-201ENST00000368309 DEFB108AA8MXU0 73 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 CLDN1O95832 211 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 HBE1P02100 147 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 ELLP55199 621 aaPredicted RBP15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 ZNF726P1Q15940 193 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 ZNF343Q6P1L6 599 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 FIP1L1Q6UN15 594 aaKnown RBP15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 DEFB124Q8NES8 71 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 PTBP3O95758 552 aaKnown RBP15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 HSPB1P04792 205 aaKnown RBP15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 CD55P08174 381 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 WNT2P09544 360 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 GLIPR1P48060 266 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 FABP9Q0Z7S8 132 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 COQ2Q96H96 371 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 HES4Q9HCC6 221 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 TMEM210A6NLX4 147 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 IGHG3P01860 377 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 PLPPR2Q96GM1 343 aa15.19■□□□□ 0.02
UBQLN4-201ENST00000368309 HEATR1Q9H583 2144 aaKnown RBP15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 INTS1Q8N201 2190 aaKnown RBP15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 IGKV3-15P01624 115 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 CECR9P0C854 216 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 SSTR5P35346 364 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 CD200P41217 278 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 RAB11AP62491 216 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 HBG1P69891 147 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 HBG2P69892 147 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 ZNF645Q8N7E2 425 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 DCTN5Q9BTE1 182 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 OTOGLQ3ZCN5 2332 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 NQO2P16083 231 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 LTC4SQ16873 150 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 ZNF787Q6DD87 383 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 WDR82Q6UXN9 313 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 RBKSQ9H477 322 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 ICE1Q9Y2F5 2266 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 UBE2L5PA0A1B0GUS4 154 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 C17orf98A8MV24 154 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 LRRC75BQ2VPJ9 315 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 ACP7Q6ZNF0 438 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 NIPSNAP3BQ9BS92 247 aa15.18■□□□□ 0.02
UBQLN4-201ENST00000368309 OR5H1A6NKK0 313 aa15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 RPS10P46783 165 aaKnown RBP15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 TLE1Q04724 770 aa15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 DPPA3Q6W0C5 159 aa15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 NINJ1Q92982 152 aa15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 MUCL1Q96DR8 90 aa15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 CLN8Q9UBY8 286 aa15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 S1PR2O95136 353 aa15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 BRWD1-AS2P59051 145 aa15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 TNFRSF9Q07011 255 aa15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 GUSBP1Q15486 140 aa15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 TCTEX1D2Q8WW35 142 aa15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 RCC1LQ96I51 464 aaKnown RBP15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 CXXC4Q9H2H0 198 aa15.17■□□□□ 0.02
UBQLN4-201ENST00000368309 RNF212BA8MTL3 300 aa15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 COL10A1Q03692 680 aa15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 KHDC3LQ587J8 217 aa15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 SPINK9Q5DT21 86 aa15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 SLC16A13Q7RTY0 426 aa15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 ZNF610Q8N9Z0 462 aa15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 LOC102723971A0A1B0GUV8 181 aa15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 OOEPA6NGQ2 149 aa15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 SLC38A11Q08AI6 406 aa15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 WDR61Q9GZS3 305 aaKnown RBP15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 OPN3Q9H1Y3 402 aaPredicted RBP15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 HMGB3O15347 200 aaKnown RBP15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 BEND4Q6ZU67 534 aa15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 OR13A1Q8NGR1 328 aa15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 TVP23CQ96ET8 276 aa15.16■□□□□ 0.02
UBQLN4-201ENST00000368309 MGAQ8IWI9 3026 aa15.15■□□□□ 0.02
UBQLN4-201ENST00000368309 RBMXL2O75526 392 aaKnown RBP15.15■□□□□ 0.02
UBQLN4-201ENST00000368309 EDDM3AQ14507 147 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms