RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 COLCA2A8K830 154 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 TRDCB7Z8K6 153 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 SDCBPO00560 298 aaPredicted RBP10.09□□□□□ -0.79
USF1-203ENST00000368021 ARPC5O15511 151 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 TGOLN2O43493 480 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 CTXN2P0C2S0 81 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 CEBPDP49716 269 aaPredicted RBP10.09□□□□□ -0.79
USF1-203ENST00000368021 PPOXP50336 477 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 NUTF2P61970 127 aaKnown RBP10.09□□□□□ -0.79
USF1-203ENST00000368021 AADACL3Q5VUY0 350 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 TEX36Q5VZQ5 186 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 C20orf204Q6ZNR8 217 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 SLC36A1Q7Z2H8 476 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 C1orf87Q8N0U7 546 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 ZCCHC24Q8N2G6 241 aaKnown RBP10.09□□□□□ -0.79
USF1-203ENST00000368021 KCNRGQ8N5I3 272 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 CD177Q8N6Q3 437 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 STOML3Q8TAV4 291 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 PLPPR1Q8TBJ4 325 aa10.09□□□□□ -0.79
USF1-203ENST00000368021 MBNL3Q9NUK0 354 aaKnown RBP10.09□□□□□ -0.79
USF1-203ENST00000368021 M0QZK8 103 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 GPR31O00270 319 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 BCL2L11O43521 198 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 ZNF737O75373 536 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 GOSR1O95249 250 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 PAX1P15863 534 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 OR3A1P47881 315 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 CDX1P47902 265 aaPredicted RBP10.08□□□□□ -0.8
USF1-203ENST00000368021 COL10A1Q03692 680 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 SLC35E4Q6ICL7 350 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 FAHD2BQ6P2I3 314 aaPredicted RBP10.08□□□□□ -0.8
USF1-203ENST00000368021 OR5R1Q8NH85 324 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 PPP1R35Q8TAP8 253 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 C2CD4CQ8TF44 421 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 RRNAD1Q96FB5 475 aaKnown RBP10.08□□□□□ -0.8
USF1-203ENST00000368021 FAHD2AQ96GK7 314 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 VSIG4Q9Y279 399 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 CHTOPQ9Y3Y2 248 aaKnown RBP10.08□□□□□ -0.8
USF1-203ENST00000368021 KPTNQ9Y664 436 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 CREBBPQ92793 2442 aa10.08□□□□□ -0.8
USF1-203ENST00000368021 TMEM30CPA0ZSE6 113 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 FGF16O43320 207 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 TXNL1O43396 289 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 GGCTO75223 188 aaKnown RBP10.07□□□□□ -0.8
USF1-203ENST00000368021 DIRAS3O95661 229 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 CYB5R3P00387 301 aaPredicted RBP10.07□□□□□ -0.8
USF1-203ENST00000368021 VSIG10L2P0DP72 767 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 FPR2P25090 351 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 MAS1LP35410 378 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 ATXN7L3Q14CW9 347 aaPredicted RBP10.07□□□□□ -0.8
USF1-203ENST00000368021 STUMQ69YW2 141 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 SLC25A42Q86VD7 318 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 BOLLQ8N9W6 283 aaKnown RBP10.07□□□□□ -0.8
USF1-203ENST00000368021 OR4A4PQ8NGN8 299 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 SAT2Q96F10 170 aaPredicted RBP10.07□□□□□ -0.8
USF1-203ENST00000368021 SNX22Q96L94 193 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 ZNF2Q9BSG1 426 aaPredicted RBP10.07□□□□□ -0.8
USF1-203ENST00000368021 BEX1Q9HBH7 125 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 CBLN4Q9NTU7 201 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 GAR1Q9NY12 217 aaKnown RBP10.07□□□□□ -0.8
USF1-203ENST00000368021 GPR132Q9UNW8 380 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 TMED3Q9Y3Q3 217 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 DSCAMO60469 2012 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 ANKRD17O75179 2603 aaKnown RBP10.07□□□□□ -0.8
USF1-203ENST00000368021 TANC2Q9HCD6 1990 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 OOEPA6NGQ2 149 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 OR5H14A6NHG9 310 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 SEC14L6B5MCN3 397 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 TMEM178BH3BS89 294 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 SIX6O95475 246 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 HPXP02790 462 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 SLC25A4P12235 298 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 DAOP14920 347 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 UBE2MP61081 183 aaKnown RBP10.07□□□□□ -0.8
USF1-203ENST00000368021 HLA-DRB3P79483 266 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 HAGHQ16775 308 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 KRBOX4Q5JUW0 171 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 TMEM88Q6PEY1 159 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 RBMS3Q6XE24 437 aaKnown RBP10.07□□□□□ -0.8
USF1-203ENST00000368021 DTX2Q86UW9 622 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 CBLN2Q8IUK8 224 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 MARCH1Q8TCQ1 289 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 RNF141Q8WVD5 230 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 SDSLQ96GA7 329 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 CABLES2Q9BTV7 478 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 TMEM106BQ9NUM4 274 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 METRNQ9UJH8 293 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 TRAPPC2LQ9UL33 140 aa10.07□□□□□ -0.8
USF1-203ENST00000368021 IGHV3OR15-7A0A075B7D8 119 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 TRBV23-1A0A0A0MS06 115 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 TRAV38-1A0A0B4J264 116 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 NPIPB11E5RHQ5 1161 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 K7N7A8 449 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 TK1P04183 234 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 HOXB5P09067 269 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 SCTP09683 121 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 OR4E1P0C645 316 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 HOXA5P20719 270 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 CD80P33681 288 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 GABRA2P47869 451 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms