RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 EDARADDQ8WWZ3 215 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 RSPO3Q9BXY4 272 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 TLNRD1Q9H1K6 362 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 SRD5A3Q9H8P0 318 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 TMEM131Q92545 1883 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 LOC102723996A0A087X1L8 192 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 CLPSP04118 112 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 FHL1Q13642 323 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 HERPUD1Q15011 391 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 SPSB2Q99619 263 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR2H1Q9GZK4 316 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 LDLRAD4O15165 306 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 RCC1P18754 421 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 HOXA6P31267 233 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 LINC00696Q6ZRV3 163 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 PRR13Q9NZ81 148 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 WIPI2Q9Y4P8 454 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 CNIH1O95406 144 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 HKR1P10072 659 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZNF506Q5JVG8 444 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 DNM1P46Q6ZS02 220 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 C1orf174Q8IYL3 243 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 RNF2Q99496 336 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 WDR13Q9H1Z4 485 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 AUP1Q9Y679 476 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 A0A0J9YW62 118 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 TMEM238LA0A1B0GVL6 79 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 A6NJY4 79 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 MARCH11A6NNE9 402 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 KCNAB3O43448 404 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 FCGR3AP08637 254 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZNF735P0CB33 412 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 CCL3P10147 92 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 PCOLCEQ15113 449 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 SLC35E3Q7Z769 313 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZCCHC14Q8WYQ9 949 aaKnown RBP4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 ANAPC13Q9BS18 74 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 TCFL5Q9UL49 500 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 THADAQ6YHU6 1953 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 MED12Q93074 2177 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 FGF12P61328 243 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR1C1Q15619 314 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR5R1Q8NH85 324 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 SAP25Q8TEE9 199 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 ADTRPQ96IZ2 230 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 ALKBH3Q96Q83 286 aaPredicted RBP4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 SIGMAR1Q99720 223 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 TMEM147Q9BVK8 224 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 PARLQ9H300 379 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 GNB4Q9HAV0 340 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 SLC7A10Q9NS82 523 aa4.65□□□□□ -1.66
CDC42BPA-204ENST00000366767 TRAV14DV4A0A0A6YYC5 116 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 TMEM30CPA0ZSE6 113 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 RBM11P57052 281 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 ERHP84090 104 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 EWSR1Q01844 656 aaKnown RBP eCLIP4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 OR11L1Q8NGX0 322 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 GALMQ96C23 342 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 MUCL1Q96DR8 90 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 ZNF385AQ96PM9 386 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 TIMP4Q99727 224 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 PCGF1Q9BSM1 259 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 NDUFAF3Q9BU61 184 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 LINC00470Q9BZP3 86 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 CACNA1BQ00975 2339 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 UNC119Q13432 240 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 OR5AS1Q8N127 324 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 Q96M66 194 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 PRDM14Q9GZV8 571 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 ASCL3Q9NQ33 180 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 A0A1B0GU03 582 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 SMIM13P0DJ93 91 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 HOXA5P20719 270 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 KLF3P57682 345 aaPredicted RBP4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 RPS16P62249 146 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 RPS23P62266 143 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 RHOBP62745 196 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 RTL8BQ17RB0 113 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 FBLN7Q53RD9 439 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 WDR25Q64LD2 544 aaPredicted RBP4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 C10orf126Q8N4M7 172 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 FAM89BQ8N5H3 189 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 CYB561D1Q8N8Q1 229 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 CITED1Q99966 193 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 LOC107984156A0A0G2JMH3 177 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 NDUFS6O75380 124 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 SRSF10O75494 262 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 LTBRP36941 435 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 MEOX1P50221 254 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 ARL17AQ8IVW1 177 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 POC1AQ8NBT0 407 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 MRPL24Q96A35 216 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 NCOR1P1Q9H4R4 102 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 PLSCR2Q9NRY7 297 aa4.65□□□□□ -1.67
CDC42BPA-204ENST00000366767 SLC25A17O43808 307 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 SMPD2O60906 423 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 MRPL14Q6P1L8 145 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 IL36GQ9NZH8 169 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 TRGV5A0A0B4J1U4 118 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 PITX3O75364 302 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms