RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 FAM90A15PP0C7V4 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A13PP0C7W8 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A14PP0C7W9 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A24PP0C7X0 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 TMEM33P57088 247 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 INPP5JQ15735 1006 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-203ENST00000361654 ADIPOQQ15848 244 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 ZNF488Q96MN9 340 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 NPFFR1Q9GZQ6 430 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 RAXQ9Y2V3 346 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 A0A1W2PQM1 296 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 EPOPA6NHQ4 379 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 DXOO77932 396 aaKnown RBP9.47□□□□□ -0.89
CLIP1-203ENST00000361654 ZNF250P15622 560 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 TNFSF10P50591 281 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 HERPUD1Q15011 391 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 CLRN3Q8NCR9 226 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 LHFPL5Q8TAF8 219 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 C7orf69Q9H7B7 122 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 ANKRD20A5PA0PJZ0 165 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 C17orf51A8MQB3 221 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 PHOX2AO14813 284 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 PSG2P11465 335 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 FAM74A3Q4VXF1 159 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 ZAR1Q86SH2 424 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 TPRX1Q8N7U7 411 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 OR8D4Q8NGM9 314 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 TMEM45BQ96B21 275 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 TMEM204Q9BSN7 226 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 RSG1Q9BU20 258 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 MRPS16Q9Y3D3 137 aaKnown RBP9.47□□□□□ -0.89
CLIP1-203ENST00000361654 SIPA1L3O60292 1781 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-203ENST00000361654 ITGB4P16144 1822 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 IGHV3OR16-10A0A075B7F0 116 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 OR2H2O95918 312 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 ELOBQ15370 118 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 CLEC18BQ6UXF7 455 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 ZNF841Q6ZN19 808 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 OR2D3Q8NGH3 330 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 HSPB8Q9UJY1 196 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 PHLDA3Q9Y5J5 127 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 TMEM255AQ5JRV8 349 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 C8orf82Q6P1X6 216 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-203ENST00000361654 TMEM74BQ9NUR3 256 aa9.47□□□□□ -0.89
CLIP1-203ENST00000361654 ZNF253O75346 499 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 TCL1AP56279 114 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 RPS20P60866 119 aaKnown RBP9.46□□□□□ -0.89
CLIP1-203ENST00000361654 HCP5Q6MZN7 132 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 KLF14Q8TD94 323 aaPredicted RBP9.46□□□□□ -0.89
CLIP1-203ENST00000361654 RHOVQ96L33 236 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 ABHD1Q96SE0 405 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 TRAF4Q9BUZ4 470 aaPredicted RBP9.46□□□□□ -0.89
CLIP1-203ENST00000361654 VAX2Q9UIW0 290 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 CTXND1A0A1B0GTU2 59 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 SLC25A17O43808 307 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 MUC1P15941 1255 aaPredicted RBP9.46□□□□□ -0.89
CLIP1-203ENST00000361654 GLRXP35754 106 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 Q6ZT83 130 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 SMIM12Q96EX1 92 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 PHYHIPLQ96FC7 376 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 PEMTQ9UBM1 199 aa9.46□□□□□ -0.89
CLIP1-203ENST00000361654 TMEM262E9PQX1 116 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 M0R143 59 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 TRGV3P03979 118 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 GPX1P07203 203 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 CSF2RBP32927 897 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 TWIST1Q15672 202 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 ADAD2Q8NCV1 583 aaKnown RBP9.46□□□□□ -0.9
CLIP1-203ENST00000361654 RNASE6Q93091 150 aaKnown RBP9.46□□□□□ -0.9
CLIP1-203ENST00000361654 MS4A3Q96HJ5 214 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 SSBP3Q9BWW4 388 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-203ENST00000361654 ZNF430Q9H8G1 570 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-203ENST00000361654 RBFOX3A6NFN3 312 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 OR10J1P30954 320 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 IGSF11Q5DX21 431 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 LDLRAD3Q86YD5 345 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 TMEM52Q8NDY8 209 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 MRAP2Q96G30 205 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 ST6GALNAC2Q9UJ37 374 aa9.46□□□□□ -0.9
CLIP1-203ENST00000361654 TRAV20A0A0B4J274 112 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 CDRT15L2A8MXV6 281 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 ISG15P05161 165 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 CRYBB2P43320 205 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 TMEM183BQ1AE95 376 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 WDFY2Q96P53 400 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 TLNRD1Q9H1K6 362 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 ARAP2Q8WZ64 1704 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 TRPM6Q9BX84 2022 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 FXYD3Q14802 87 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 HLA-DRB5Q30154 266 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 TMEM88Q6PEY1 159 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 JPT1Q9UK76 154 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 DTX4Q9Y2E6 619 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 ZNF645Q8N7E2 425 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 PILRAQ9UKJ1 303 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 A8MWL6 223 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 CTDSPLO15194 276 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 PRSS23O95084 383 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 LINC00869P0C866 280 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms