RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 RPS11P62280 158 aaKnown RBP eCLIP11.83□□□□□ -0.52
CTR9-201ENST00000361367 RHOBP62745 196 aa11.83□□□□□ -0.52
CTR9-201ENST00000361367 SCGB2A2Q13296 93 aa11.83□□□□□ -0.52
CTR9-201ENST00000361367 SPNS3Q6ZMD2 512 aa11.83□□□□□ -0.52
CTR9-201ENST00000361367 Q6ZS92 163 aa11.83□□□□□ -0.52
CTR9-201ENST00000361367 OR10Z1Q8NGY1 313 aa11.83□□□□□ -0.52
CTR9-201ENST00000361367 CXorf58Q96LI9 332 aa11.83□□□□□ -0.52
CTR9-201ENST00000361367 MAP1LC3BQ9GZQ8 125 aa11.83□□□□□ -0.52
CTR9-201ENST00000361367 VSIG10L2P0DP72 767 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 NBL1P41271 181 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 CNN1P51911 297 aaKnown RBP11.82□□□□□ -0.52
CTR9-201ENST00000361367 NCR3LG1Q68D85 454 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 TVP23CQ96ET8 276 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 SH2D2AQ9NP31 389 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 RALYQ9UKM9 306 aaKnown RBP11.82□□□□□ -0.52
CTR9-201ENST00000361367 SRCAPQ6ZRS2 3230 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.82□□□□□ -0.52
CTR9-201ENST00000361367 TOX4O94842 621 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 LYZP61626 148 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 SLC25A22Q9H936 323 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 LOC105371242A0A075B767 164 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 CDC34P49427 236 aaPredicted RBP11.82□□□□□ -0.52
CTR9-201ENST00000361367 UNC119Q13432 240 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 FAM201AQ5SY85 155 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 PRR27Q6MZM9 219 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 WBP1Q96G27 269 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 POMT1Q9Y6A1 747 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 MED19A0JLT2 244 aaPredicted RBP11.82□□□□□ -0.52
CTR9-201ENST00000361367 H0Y980 276 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 TXNL1O43396 289 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 HTR1DP28221 377 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 ECSCRQ19T08 205 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 ZNF645Q8N7E2 425 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 PRSS33Q8NF86 280 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 OR10G4Q8NGN3 311 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 OR10G9Q8NGN4 311 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 OR10G7Q8NGN6 311 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 ZNF331Q9NQX6 463 aaPredicted RBP11.82□□□□□ -0.52
CTR9-201ENST00000361367 RCC2Q9P258 522 aaKnown RBP11.82□□□□□ -0.52
CTR9-201ENST00000361367 JPT1Q9UK76 154 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 GAB2Q9UQC2 676 aa11.82□□□□□ -0.52
CTR9-201ENST00000361367 ZNF729A6NN14 1252 aaPredicted RBP11.81□□□□□ -0.52
CTR9-201ENST00000361367 LIPFP07098 398 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 SULT1A1P50225 295 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 ACP7Q6ZNF0 438 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 LEAP2Q969E1 77 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 C17orf100A8MU93 164 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 IQCF6A8MYZ5 107 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 PRR32B1ATL7 298 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 PJVKQ0ZLH3 352 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 BTNL8Q6UX41 500 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 TCTEX1D1Q8N7M0 179 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 GRAMD2BQ96HH9 432 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 ATP5SQ99766 215 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 ZDHHC11Q9H8X9 412 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 SSTR5P35346 364 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 ASPHD2Q6ICH7 369 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 ABHD12Q8N2K0 398 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 OR1L4Q8NGR5 311 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 OR9G1Q8NH87 305 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 TMEM222Q9H0R3 208 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 CLN5O75503 358 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 RPL35P42766 123 aaKnown RBP11.81□□□□□ -0.52
CTR9-201ENST00000361367 H3F3AP84243 136 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 COMMD1Q8N668 190 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 FGFBP3Q8TAT2 258 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 OR51B2Q9Y5P1 312 aa11.81□□□□□ -0.52
CTR9-201ENST00000361367 RAB19A4D1S5 217 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 KIR2DL2P43627 348 aaPredicted RBP11.8□□□□□ -0.52
CTR9-201ENST00000361367 EWSR1Q01844 656 aaKnown RBP eCLIP11.8□□□□□ -0.52
CTR9-201ENST00000361367 USF2Q15853 346 aaPredicted RBP11.8□□□□□ -0.52
CTR9-201ENST00000361367 GUK1Q16774 197 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 LILRB1Q8NHL6 650 aaPredicted RBP11.8□□□□□ -0.52
CTR9-201ENST00000361367 PHYHIPLQ96FC7 376 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 GPHA2Q96T91 129 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 ZNF320A2RRD8 509 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 H0YL77 283 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 RPL27AP46776 148 aaKnown RBP11.8□□□□□ -0.52
CTR9-201ENST00000361367 CLLU1Q5K131 121 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 SLC35E4Q6ICL7 350 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 OVCH2Q7RTZ1 564 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 POC1AQ8NBT0 407 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 OR10S1Q8NGN2 331 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 NEU4Q8WWR8 484 aaPredicted RBP11.8□□□□□ -0.52
CTR9-201ENST00000361367 WASHC3Q9Y3C0 194 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 USF3Q68DE3 2245 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 A0A0G2JK05 382 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 LEUTXA8MZ59 168 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 PPP5D1E7EU14 171 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 PGLYRP1O75594 196 aaPredicted RBP11.8□□□□□ -0.52
CTR9-201ENST00000361367 FAM106CPP0CH98 169 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 NHLH1Q02575 133 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 SSMEM1Q8WWF3 244 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 DOCK7Q96N67 2140 aa11.8□□□□□ -0.52
CTR9-201ENST00000361367 ZG16O60844 167 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 FOXH1O75593 365 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 ZNF90Q03938 601 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 NPDC1Q9NQX5 325 aaPredicted RBP11.79□□□□□ -0.52
CTR9-201ENST00000361367 PLSCR4Q9NRQ2 329 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 BSCL2Q96G97 398 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms