RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 A0A1B0GV50 99 aa18.99■□□□□ 0.63
LDB1-201ENST00000361198 PSG2P11465 335 aa18.99■□□□□ 0.63
LDB1-201ENST00000361198 S100A12P80511 92 aa18.99■□□□□ 0.63
LDB1-201ENST00000361198 PTBP3O95758 552 aaKnown RBP18.98■□□□□ 0.63
LDB1-201ENST00000361198 EPHA1P21709 976 aa18.98■□□□□ 0.63
LDB1-201ENST00000361198 CEACAM6P40199 344 aa18.98■□□□□ 0.63
LDB1-201ENST00000361198 KRBOX4Q5JUW0 171 aa18.98■□□□□ 0.63
LDB1-201ENST00000361198 ASCL5Q7RTU5 278 aa18.98■□□□□ 0.63
LDB1-201ENST00000361198 RBM7Q9Y580 266 aaKnown RBP18.98■□□□□ 0.63
LDB1-201ENST00000361198 NBEAQ8NFP9 2946 aa18.98■□□□□ 0.63
LDB1-201ENST00000361198 TIMP3P35625 211 aa18.98■□□□□ 0.63
LDB1-201ENST00000361198 AESQ08117 197 aa18.98■□□□□ 0.63
LDB1-201ENST00000361198 TIMM23BQ5SRD1 257 aa18.98■□□□□ 0.63
LDB1-201ENST00000361198 LRP11Q86VZ4 500 aa18.98■□□□□ 0.63
LDB1-201ENST00000361198 UNKLQ9H9P5 680 aaKnown RBP18.98■□□□□ 0.63
LDB1-201ENST00000361198 PPP1R3CQ9UQK1 317 aa18.98■□□□□ 0.63
LDB1-201ENST00000361198 A0A0G2JRQ6 117 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 C1orf174Q8IYL3 243 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 FAM24BQ8N5W8 94 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 DUSP13Q9UII6 198 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 A0A1B0GU03 582 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 A0A1B0GWJ7 208 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 TMEM30CPA0ZSE6 113 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 KIAA1324LA8MWY0 1029 aaPredicted RBP18.97■□□□□ 0.63
LDB1-201ENST00000361198 M0R1B8 84 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 NXPH3O95157 252 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 ARG1P05089 322 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 S100A6P06703 90 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 SERPINE2P07093 398 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 TMEM217Q8N7C4 229 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 YPEL4Q96NS1 127 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 ATP5SQ99766 215 aa18.97■□□□□ 0.63
LDB1-201ENST00000361198 WRBO00258 174 aa18.96■□□□□ 0.63
LDB1-201ENST00000361198 S100A8P05109 93 aa18.96■□□□□ 0.63
LDB1-201ENST00000361198 DPPA3Q6W0C5 159 aa18.96■□□□□ 0.63
LDB1-201ENST00000361198 OR2Z1Q8NG97 314 aa18.96■□□□□ 0.63
LDB1-201ENST00000361198 OR1L1Q8NH94 360 aa18.96■□□□□ 0.63
LDB1-201ENST00000361198 METTL1Q9UBP6 276 aaKnown RBP18.96■□□□□ 0.63
LDB1-201ENST00000361198 METRNQ9UJH8 293 aa18.96■□□□□ 0.63
LDB1-201ENST00000361198 A0A1W2PPE2 198 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 A0A1W2PPE3 182 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 OR3A1P47881 315 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 GPR146Q96CH1 333 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 COQ2Q96H96 371 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 KCNIP1Q9NZI2 227 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 KCNS2Q9ULS6 477 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 PIEZO2Q9H5I5 2752 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 ICE1Q9Y2F5 2266 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 hCG_1809904A0A1W2PP81 198 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 A0A1W2PR64 198 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 A0A1W2PRV1 198 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 C12orf77C9JDV5 145 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 IGHV2-5P01817 119 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 SRP19P09132 144 aaKnown RBP18.95■□□□□ 0.62
LDB1-201ENST00000361198 TAS2R30P59541 319 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 RPS23P62266 143 aaKnown RBP18.95■□□□□ 0.62
LDB1-201ENST00000361198 SLC35E4Q6ICL7 350 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 ZNF295-AS1Q8N0V1 137 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 PRR7Q8TB68 274 aa18.95■□□□□ 0.62
LDB1-201ENST00000361198 PUS1Q9Y606 427 aaKnown RBP eCLIP18.95■□□□□ 0.62
LDB1-201ENST00000361198 IGKV1-39P01597 117 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 IGKV1D-39P04432 117 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 RUNX1Q01196 453 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 KRTCAP3Q53RY4 240 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 FAM57AQ8TBR7 257 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 ZGRF1Q86YA3 2104 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 DIDO1Q9BTC0 2240 aaKnown RBP18.94■□□□□ 0.62
LDB1-201ENST00000361198 MKRN2OSH3BPM6 223 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 TXNL1O43396 289 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 B2MP61769 119 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 COL10A1Q03692 680 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 SMIM21Q3B7S5 101 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 AKR1C8PQ5T2L2 129 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 FAM53AQ6NSI3 398 aaPredicted RBP18.94■□□□□ 0.62
LDB1-201ENST00000361198 C1QL4Q86Z23 238 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 LRRC29Q8WV35 223 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 ABHD17AQ96GS6 310 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 RAB40CQ96S21 281 aa18.94■□□□□ 0.62
LDB1-201ENST00000361198 DFFBO76075 338 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 HSPB1P04792 205 aaKnown RBP18.93■□□□□ 0.62
LDB1-201ENST00000361198 SMIM6P0DI80 62 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 CEACAM8P31997 349 aaPredicted RBP18.93■□□□□ 0.62
LDB1-201ENST00000361198 GABRA2P47869 451 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 IZUMO4Q1ZYL8 232 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 ZNF506Q5JVG8 444 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 FAM180AQ6UWF9 173 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 DRAM1Q8N682 238 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 TPRX1Q8N7U7 411 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 GALMQ96C23 342 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 RBMXL1Q96E39 390 aaKnown RBP18.93■□□□□ 0.62
LDB1-201ENST00000361198 CUL9Q8IWT3 2517 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 CRYAAP02489 173 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 TLE4Q04727 773 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 ADAM5Q6NVV9 412 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 STX12Q86Y82 276 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 LSM10Q969L4 123 aaKnown RBP18.93■□□□□ 0.62
LDB1-201ENST00000361198 MUCL1Q96DR8 90 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 SFXN3Q9BWM7 321 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 WSB1Q9Y6I7 421 aa18.93■□□□□ 0.62
LDB1-201ENST00000361198 PLCE1Q9P212 2302 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms