RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 BRCA1P38398 1863 aaKnown RBP12.04□□□□□ -0.48
SMC5-201ENST00000361138 DMRTA1Q5VZB9 504 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 LSM10Q969L4 123 aaKnown RBP12.04□□□□□ -0.48
SMC5-201ENST00000361138 FOXJ2Q9P0K8 574 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 HERPUD1Q15011 391 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 C10orf113Q5VZT2 155 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 TMEM230Q96A57 120 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 ZNF638Q14966 1978 aaKnown RBP12.04□□□□□ -0.48
SMC5-201ENST00000361138 CCDC88CQ9P219 2028 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 PRR32B1ATL7 298 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 FAM90A26D6RGX4 464 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 MPDU1O75352 247 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 FAM87AP0C7U9 286 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 QTRT1Q9BXR0 403 aaKnown RBP12.04□□□□□ -0.48
SMC5-201ENST00000361138 PRRC2BQ5JSZ5 2229 aaKnown RBP12.04□□□□□ -0.48
SMC5-201ENST00000361138 TRBV9A0A0B4J1U6 114 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 GABRA6Q16445 453 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 TUSC5Q8IXB3 177 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 CYTL1Q9NRR1 136 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 NDUFA2O43678 99 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 VENTXO95231 258 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 RIGQ13278 110 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 ICAM4Q14773 271 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 LURAP1LQ8IV03 231 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 ZCCHC14Q8WYQ9 949 aaKnown RBP12.04□□□□□ -0.48
SMC5-201ENST00000361138 OR2V2Q96R30 315 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 OR6C3Q9NZP0 311 aa12.04□□□□□ -0.48
SMC5-201ENST00000361138 CIDEAO60543 219 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 HIST1H2BKO60814 126 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 HLA-DQA1P01909 254 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 HIST1H2BJP06899 126 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 HIST1H2BOP23527 126 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 NPY1RP25929 384 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 HIST1H2BBP33778 126 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 HIST1H2BDP58876 126 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 HIST1H2BCP62807 126 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 HIST2H2BEQ16778 126 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.03□□□□□ -0.48
SMC5-201ENST00000361138 IBA57Q5T440 356 aaKnown RBP12.03□□□□□ -0.48
SMC5-201ENST00000361138 HIST1H2BHQ93079 126 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 HIST1H2BNQ99877 126 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 HIST1H2BMQ99879 126 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 SDF2L1Q9HCN8 221 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 OR2T6Q8NHC8 308 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 CTSBP07858 339 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 SSX8Q7RTT4 187 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 ABHD3Q8WU67 409 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 C18orf12Q96KH6 178 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 ZPBPQ9BS86 351 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 TRGV5A0A0B4J1U4 118 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 P2RY6Q15077 328 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 ZNF766Q5HY98 468 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 C1QL4Q86Z23 238 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 RBM14Q96PK6 669 aaKnown RBP12.03□□□□□ -0.48
SMC5-201ENST00000361138 SAP30LQ9HAJ7 183 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 PLA2G3Q9NZ20 509 aa12.03□□□□□ -0.48
SMC5-201ENST00000361138 A0A1W2PQF6 199 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 C1QL2Q7Z5L3 287 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 TGIF2LYQ8IUE0 185 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 SLC22A18ASQ8N1D0 253 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 SARAFQ96BY9 339 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 WDYHV1Q96HA8 205 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 NPVFQ9HCQ7 196 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 PRNDQ9UKY0 176 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 A0A1W2PN81 502 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 TMEM250H0YL14 139 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 ARL14EPLP0DKL9 152 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 SCGB1C2P0DMR2 95 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 MEOX1P50221 254 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 TNFRSF9Q07011 255 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 FGFRL1Q8N441 504 aa12.02□□□□□ -0.48
SMC5-201ENST00000361138 DNPH1O43598 174 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 LCN2P80188 198 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 MRPS11P82912 194 aaKnown RBP12.02□□□□□ -0.49
SMC5-201ENST00000361138 AESQ08117 197 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 RTP5Q14D33 572 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 SPRED2Q7Z698 418 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 RCC1LQ96I51 464 aaKnown RBP12.02□□□□□ -0.49
SMC5-201ENST00000361138 IL36GQ9NZH8 169 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 GAGE10A6NGK3 116 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 TMEM210A6NLX4 147 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 C12orf54Q6X4T0 127 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 HPRT1P00492 218 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 MFAP2P55001 183 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 ZADH2Q8N4Q0 377 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 OR8A1Q8NGG7 326 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 IER2Q9BTL4 223 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 RPRMQ9NS64 109 aa12.02□□□□□ -0.49
SMC5-201ENST00000361138 LOC390937A0A1W2PQ73 354 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 MST1P26927 711 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 LGALS4P56470 323 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 C1orf53Q5VUE5 145 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 DHRS13Q6UX07 377 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 ABHD14AQ9BUJ0 271 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 CA2P00918 260 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 STARD6P59095 220 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 TRA2AQ13595 282 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMC5-201ENST00000361138 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.01□□□□□ -0.49
SMC5-201ENST00000361138 NPIPB13A6NJU9 1138 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms