RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 GHITMQ9H3K2 345 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 ABCB10Q9NRK6 738 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 ZNRD1Q9P1U0 126 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 IGHV3OR16-10A0A075B7F0 116 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 A0A1W2PRD5 423 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 A0A1W2PRF3 423 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 A0A1W2PRM7 423 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 DISC1C4P0D8 188 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 LY6LH3BQJ8 138 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 BUB1B-PAK6H3BSN5 160 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 NPFFO15130 113 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 PPYP01298 95 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 AMY2AP04746 511 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 FAUP35544 74 aaKnown RBP10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 LDLRAD2Q5SZI1 272 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 FAAP20Q6NZ36 180 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 LHFPL1Q86WI0 220 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 ODF3L1Q8IXM7 274 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 BORCS5Q969J3 196 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 MOB3AQ96BX8 217 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 C7orf50Q9BRJ6 194 aaKnown RBP10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 IFI27L2Q9H2X8 130 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 SLC2A8Q9NY64 477 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 NUP50Q9UKX7 468 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 GAB2Q9UQC2 676 aa10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 TBL2Q9Y4P3 447 aaKnown RBP10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 SONP18583 2426 aaKnown RBP10.07□□□□□ -0.8
NIF3L1-201ENST00000359683 IGKV1D-13A0A0B4J2D9 117 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 NAP1L6A6NFF2 107 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 ST8SIA5O15466 376 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 OR8U9P0C7N5 309 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 IGKV1-13P0DP09 117 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 HTR1DP28221 377 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 LUMP51884 338 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 ZNF137PP52743 207 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 LGALS4P56470 323 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 MINOS1Q5TGZ0 78 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 AADACL3Q5VUY0 350 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 OR8U1Q8NH10 309 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 TERB2Q8NHR7 220 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 ST6GALNAC6Q969X2 333 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 CREB3L1Q96BA8 519 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 AJUBAQ96IF1 538 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 DPM3Q9P2X0 92 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 RNF150Q9ULK6 438 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 MINOS1-NBL1R4GNA1 71 aa10.06□□□□□ -0.8
NIF3L1-201ENST00000359683 LINC00854A0A1B0GVQ3 168 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 OR5H14A6NHG9 310 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 LEUTXA8MZ59 168 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 RUSC1-AS1Q66K80 236 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 BRD3OSQ6XYD6 125 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 C9orf139Q6ZV77 190 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 LHFPL4Q7Z7J7 247 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 LYG1Q8N1E2 194 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 OR51S1Q8NGJ8 323 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 OR10X1Q8NGY0 326 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 ABHD14BQ96IU4 210 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 PRRT1Q99946 306 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 ZNF251Q9BRH9 671 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 PIPOXQ9P0Z9 390 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 TBC1D24Q9ULP9 559 aa10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 AMMECR1Q9Y4X0 333 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-201ENST00000359683 CENPXA8MT69 81 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 RAB29O14966 203 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 PROP1O75360 226 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 SLC22A5O76082 557 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 HNF1AP20823 631 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 SAA4P35542 130 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 UCP3P55916 312 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 HERV-K104P61576 105 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 ASAH1Q13510 395 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 SCGB2B2Q4G0G5 96 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 OR13C8Q8NGS7 320 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 MRGPRFQ96AM1 343 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 MALSU1Q96EH3 234 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 MCUBQ9NWR8 336 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 SCP2D1Q9UJQ7 156 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 ZNF221Q9UK13 617 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 RBM7Q9Y580 266 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 ANK3Q12955 4377 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 LYRM1O43325 122 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 IGLV2-14P01704 120 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 EPHA1P21709 976 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 IL3RAP26951 378 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 GNRHRP30968 328 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 CEACAM3P40198 252 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 FXYD4P59646 89 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 MSMO1Q15800 293 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 TPTE2P1Q5T6R2 138 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 ZNF833PQ6ZTB9 187 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 IL17RELQ6ZVW7 336 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 C17orf50Q8WW18 174 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 MDFIQ99750 246 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 SLC5A7Q9GZV3 580 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 MS4A7Q9GZW8 240 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 FXYD6Q9H0Q3 95 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 OR2D2Q9H210 308 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 PALMDQ9NP74 551 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 CCL28Q9NRJ3 127 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms