RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 LIMS1P48059 325 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 LYG1Q8N1E2 194 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 VSTM2LQ96N03 204 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 HIST1H4GQ99525 98 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 PSG2P11465 335 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 HOXA5P20719 270 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 SFTPA2Q8IWL1 248 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 SFTPA1Q8IWL2 248 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 OBSL1O75147 1896 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 EML6Q6ZMW3 1958 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 TANC2Q9HCD6 1990 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 VENTXO95231 258 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 PIGYQ3MUY2 71 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 RIPPLY2Q5TAB7 128 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 ONECUT1Q9UBC0 465 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 KIAA1549Q9HCM3 1950 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 ID4P47928 161 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 RNPS1Q15287 305 aaKnown RBP7.67□□□□□ -1.18
COL6A6-201ENST00000358511 LRRC10Q5BKY1 277 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 BHLHA9Q7RTU4 235 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 RFLNBQ8N5W9 214 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 OR1N2Q8NGR9 330 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 OR10AG1Q8NH19 301 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 TMEM45BQ96B21 275 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 ATP23Q9Y6H3 246 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 NCKAP5O14513 1909 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 SRIP30626 198 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 PMELP40967 661 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 CCL4L1Q8NHW4 92 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 SMIM8Q96KF7 97 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 CD27P26842 260 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 VSTM2AQ8TAG5 236 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 PARLQ9H300 379 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 GRIFINA4D1Z8 144 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 H3BMH7 237 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 HPRT1P00492 218 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 OR13G1Q8NGZ3 307 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 ZNF32P17041 273 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 FHITP49789 147 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 PGPEP1Q9NXJ5 209 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 A0A1W2PR80 420 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 LILRA5A6NI73 299 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 UBE2L6O14933 153 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 ISG15P05161 165 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 PNLIPP16233 465 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 DLX1P56177 255 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 LAIR2Q6ISS4 152 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 VCX2Q9H322 139 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 CCL28Q9NRJ3 127 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 KBTBD11O94819 623 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 SMIM13P0DJ93 91 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 P2RY4P51582 365 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 CCR5P51681 352 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 LYZP61626 148 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 DYNLRB2Q8TF09 96 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 SNRNP40Q96DI7 357 aaKnown RBP7.66□□□□□ -1.18
COL6A6-201ENST00000358511 NCOA6Q14686 2063 aaPredicted RBP7.66□□□□□ -1.18
COL6A6-201ENST00000358511 OR2Y1Q8NGV0 311 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 FLYWCH2Q96CP2 140 aaKnown RBP7.66□□□□□ -1.18
COL6A6-201ENST00000358511 RNF122Q9H9V4 155 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 RBPMS2Q6ZRY4 209 aaKnown RBP7.66□□□□□ -1.18
COL6A6-201ENST00000358511 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.66□□□□□ -1.18
COL6A6-201ENST00000358511 C8orf44Q96CB5 159 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 IP6K3Q96PC2 410 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 GPR132Q9UNW8 380 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 MOB4Q9Y3A3 225 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 MS4A18H0YCH9 400 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 MS4A18Q3C1V0 323 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 ATOH7Q8N100 152 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 KCNS1Q96KK3 526 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 TMEM70Q9BUB7 260 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 PRNDQ9UKY0 176 aa7.66□□□□□ -1.18
COL6A6-201ENST00000358511 TBL2Q9Y4P3 447 aaKnown RBP7.66□□□□□ -1.18
COL6A6-201ENST00000358511 CXCL13O43927 109 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 FCGR3AP08637 254 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 IGFBP6P24592 240 aaPredicted RBP7.65□□□□□ -1.18
COL6A6-201ENST00000358511 ZFP36L2P47974 494 aaKnown RBP7.65□□□□□ -1.18
COL6A6-201ENST00000358511 MFAP4P55083 255 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 RPL30P62888 115 aaKnown RBP7.65□□□□□ -1.18
COL6A6-201ENST00000358511 CBLN3Q6UW01 205 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 SLC36A1Q7Z2H8 476 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 TGIF2LYQ8IUE0 185 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 SF3B6Q9Y3B4 125 aaKnown RBP7.65□□□□□ -1.18
COL6A6-201ENST00000358511 PAPPA2Q9BXP8 1791 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 A0A0U1RQV5 110 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 ARL14EPLP0DKL9 152 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 FGF5P12034 268 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 OR2Z1Q8NG97 314 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 ZNF137PP52743 207 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 RRN3P1Q2M238 152 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 ZADH2Q8N4Q0 377 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 MRGPRDQ8TDS7 321 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 LOC389332A0A1B0GUA5 103 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 CALHM1Q8IU99 346 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 LSM10Q969L4 123 aaKnown RBP7.65□□□□□ -1.18
COL6A6-201ENST00000358511 PSMG3Q9BT73 122 aaPredicted RBP7.65□□□□□ -1.18
COL6A6-201ENST00000358511 MPC1Q9Y5U8 109 aa7.65□□□□□ -1.18
COL6A6-201ENST00000358511 PPP1CCP36873 323 aaKnown RBP7.65□□□□□ -1.19
COL6A6-201ENST00000358511 C19orf48Q6RUI8 117 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 CXorf67Q86X51 503 aaPredicted RBP7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms