RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 DOCK7Q96N67 2140 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 PCDH15Q96QU1 1955 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 NCOR1O75376 2440 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 A0A0U1RQV5 110 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 PDCD6O75340 191 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 ZNF253O75346 499 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 VDAC1P21796 283 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 GCH1P30793 250 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 MPLP40238 635 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 FABP6P51161 128 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 ZNF573Q86YE8 665 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 ZNF611Q8N823 705 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 GUCD1Q96NT3 240 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 OCIAD1Q9NX40 245 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 A0A1W2PQM1 296 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 LRP5LA4QPB2 252 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 SNURFLB1AK76 121 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 HSBP1L1C9JCN9 74 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 KRASP01116 189 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 LINC00614P0C842 121 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 LYL1P12980 280 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 CCL2P13500 99 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 ATP6V1FQ16864 119 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 UNQ5815/PRO19632Q6UWF5 114 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 LHFPL1Q86WI0 220 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 ZNF808Q8N4W9 903 aaPredicted RBP8.58□□□□□ -1.04
RNF40-202ENST00000357890 IFI44Q8TCB0 444 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 LYZL4Q96KX0 146 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 FOXB1Q99853 325 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 PGPEP1LA6NFU8 196 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 E9PLN8 166 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 CBR3O75828 277 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 SLC25A6P12236 298 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 ZNF17P17021 662 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 TMEM11P17152 192 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 COX5AP20674 150 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 TRIM61Q5EBN2 209 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 Q96M66 194 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 PLEKHA3Q9HB20 300 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 CISD1Q9NZ45 108 aaKnown RBP8.57□□□□□ -1.04
RNF40-202ENST00000357890 TRBV24-1A0A075B6N3 115 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 IGLV3-32A0A0A0MS00 114 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 NDUFB4O95168 129 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 FUT6P51993 359 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 IL11RAQ14626 422 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 RAB35Q15286 201 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 KCNMB1Q16558 191 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 LTC4SQ16873 150 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 HLA-BQ31612 363 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 C5orf24Q7Z6I8 188 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 HSBP1O75506 76 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 GPM6AP51674 278 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 RPL23P62829 140 aaKnown RBP8.57□□□□□ -1.04
RNF40-202ENST00000357890 PRSS8Q16651 343 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 Q56UQ5 140 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 OR4A47Q6IF82 309 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 FAM89BQ8N5H3 189 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 TCTEX1D1Q8N7M0 179 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 TMEM170AQ8WVE7 144 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 PINX1Q96BK5 328 aaKnown RBP8.57□□□□□ -1.04
RNF40-202ENST00000357890 C10orf35Q96D05 121 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 ANAPC16Q96DE5 110 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 C1orf147Q96MC9 270 aaPredicted RBP8.57□□□□□ -1.04
RNF40-202ENST00000357890 UHRF2Q96PU4 802 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 FAM234AQ9H0X4 552 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 WIPI2Q9Y4P8 454 aa8.57□□□□□ -1.04
RNF40-202ENST00000357890 SPTAN1Q13813 2472 aaKnown RBP8.56□□□□□ -1.04
RNF40-202ENST00000357890 A0A0J9YW62 118 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 SYNGR2O43760 224 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 GDF9O60383 454 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 DEFA4P12838 97 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 HOXA6P31267 233 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 GABRA2P47869 451 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 RAC1P63000 192 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 EIF3IQ13347 325 aaKnown RBP8.56□□□□□ -1.04
RNF40-202ENST00000357890 S100A7AQ86SG5 101 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 CISD2Q8N5K1 135 aaKnown RBP8.56□□□□□ -1.04
RNF40-202ENST00000357890 GATAD1Q8WUU5 269 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 MTCH1Q9NZJ7 389 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 ZNF581Q9P0T4 197 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 EP300Q09472 2414 aaPredicted RBP8.56□□□□□ -1.04
RNF40-202ENST00000357890 C5orf49A4QMS7 147 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 WIPI1Q5MNZ9 446 aaPredicted RBP8.56□□□□□ -1.04
RNF40-202ENST00000357890 LYPD6Q86Y78 171 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 OR2V1Q8NHB1 315 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 CPT1CQ8TCG5 803 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 ANGPTL4Q9BY76 406 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 OR6C3Q9NZP0 311 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 WASHC3Q9Y3C0 194 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 EML5Q05BV3 1969 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 TRANK1O15050 2925 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 PROB1E7EW31 1015 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 KBTBD11O94819 623 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 CCL1P22362 96 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 ANOS1P23352 680 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 LDLRAD2Q5SZI1 272 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 MRPL54Q6P161 138 aaKnown RBP8.56□□□□□ -1.04
RNF40-202ENST00000357890 NUFIP2Q7Z417 695 aaKnown RBP8.56□□□□□ -1.04
RNF40-202ENST00000357890 GBGT1Q8N5D6 347 aa8.56□□□□□ -1.04
RNF40-202ENST00000357890 OR10P1Q8NGE3 313 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms