RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 MKRN2OSH3BPM6 223 aa14.96□□□□□ -0.02
RTN4-204ENST00000357732 WNT5AP41221 380 aa14.96□□□□□ -0.02
RTN4-204ENST00000357732 ADIRFQ15847 76 aa14.96□□□□□ -0.02
RTN4-204ENST00000357732 PDZD11Q5EBL8 140 aa14.96□□□□□ -0.02
RTN4-204ENST00000357732 C17orf78Q8N4C9 275 aa14.96□□□□□ -0.02
RTN4-204ENST00000357732 OR51G1Q8NGK1 321 aa14.96□□□□□ -0.02
RTN4-204ENST00000357732 CT55Q8WUE5 264 aa14.96□□□□□ -0.02
RTN4-204ENST00000357732 ACTR3CQ9C0K3 210 aaPredicted RBP14.96□□□□□ -0.02
RTN4-204ENST00000357732 SOX15O60248 233 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 NEURL1O76050 574 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 OR2H2O95918 312 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 FGF7P21781 194 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 C16orf82Q7Z2V1 217 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 TIPARPQ7Z3E1 657 aaKnown RBP14.95□□□□□ -0.02
RTN4-204ENST00000357732 ZNF645Q8N7E2 425 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 BTF3L4Q96K17 158 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 CIB3Q96Q77 187 aaPredicted RBP14.95□□□□□ -0.02
RTN4-204ENST00000357732 PPP5D1E7EU14 171 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 H7BYZ3 331 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 P0C879 139 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 IL2RGP31785 369 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 PDLIM4P50479 330 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 ELLP55199 621 aaPredicted RBP14.95□□□□□ -0.02
RTN4-204ENST00000357732 RPL23P62829 140 aaKnown RBP14.95□□□□□ -0.02
RTN4-204ENST00000357732 SRYQ05066 204 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 SPINK14Q6IE38 97 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.95□□□□□ -0.02
RTN4-204ENST00000357732 OR1P1Q8NH06 330 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 SSX3Q99909 188 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 ABI3Q9P2A4 366 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 PCSK5Q92824 1860 aa14.95□□□□□ -0.02
RTN4-204ENST00000357732 SH2D1BO14796 132 aa14.94□□□□□ -0.02
RTN4-204ENST00000357732 WDR1O75083 606 aa14.94□□□□□ -0.02
RTN4-204ENST00000357732 RHBDL1O75783 438 aa14.94□□□□□ -0.02
RTN4-204ENST00000357732 CLDN1O95832 211 aa14.94□□□□□ -0.02
RTN4-204ENST00000357732 FOXG1P55316 489 aaPredicted RBP14.94□□□□□ -0.02
RTN4-204ENST00000357732 DBX2Q6ZNG2 339 aa14.94□□□□□ -0.02
RTN4-204ENST00000357732 PRO3102Q9H379 93 aa14.94□□□□□ -0.02
RTN4-204ENST00000357732 GP6Q9HCN6 339 aa14.94□□□□□ -0.02
RTN4-204ENST00000357732 LAMP3Q9UQV4 416 aa14.94□□□□□ -0.02
RTN4-204ENST00000357732 LY86O95711 162 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 HRASP01112 189 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 ZNF16P17020 682 aaPredicted RBP14.93□□□□□ -0.02
RTN4-204ENST00000357732 COX5AP20674 150 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 CA6P23280 308 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 SRP14P37108 136 aaKnown RBP14.93□□□□□ -0.02
RTN4-204ENST00000357732 CEACAM6P40199 344 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 GALR1P47211 349 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 CATR1Q13166 79 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 C4orf17Q53FE4 359 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.93□□□□□ -0.02
RTN4-204ENST00000357732 A0A1W2PR80 420 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 ARGFXA6NJG6 315 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 LILRA1O75019 489 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 GCGP01275 180 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 TYMSP04818 313 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 VWC2Q2TAL6 325 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 ACOT6Q3I5F7 207 aaPredicted RBP14.93□□□□□ -0.02
RTN4-204ENST00000357732 FIP1L1Q6UN15 594 aaKnown RBP14.93□□□□□ -0.02
RTN4-204ENST00000357732 MCEMP1Q8IX19 187 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 UBALD2Q8IYN6 164 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 THOC3Q96J01 351 aaKnown RBP14.93□□□□□ -0.02
RTN4-204ENST00000357732 NOL4LQ96MY1 436 aaPredicted RBP14.93□□□□□ -0.02
RTN4-204ENST00000357732 KCNIP1Q9NZI2 227 aa14.93□□□□□ -0.02
RTN4-204ENST00000357732 IGKV1D-33P01593 117 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 IGKV1-33P01594 117 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 CELA3AP09093 270 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 TMEM249Q2WGJ8 235 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 ABHD17BQ5VST6 288 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 OR1K1Q8NGR3 316 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 TMEM170AQ8WVE7 144 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 RAB24Q969Q5 203 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 PARLQ9H300 379 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 LRRC30A6NM36 301 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 GABRA6Q16445 453 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 ACSM6Q6P461 480 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 SSX9Q7RTT3 188 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 NUFIP2Q7Z417 695 aaKnown RBP14.92□□□□□ -0.02
RTN4-204ENST00000357732 OR10P1Q8NGE3 313 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 OR10G9Q8NGN4 311 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 OR10G7Q8NGN6 311 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 TTTY12Q9BZ98 90 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 TRIOBPQ9H2D6 2365 aa14.92□□□□□ -0.02
RTN4-204ENST00000357732 A0A087X0M5 115 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 A0A1B0GX30 115 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 SIRPB1O00241 398 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 GGCTO75223 188 aaKnown RBP14.91□□□□□ -0.02
RTN4-204ENST00000357732 CD99P14209 185 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 COL10A1Q03692 680 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 MRPL49Q13405 166 aaKnown RBP14.91□□□□□ -0.02
RTN4-204ENST00000357732 OR8G2PQ6IF36 304 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 PRR18Q8N4B5 295 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 CISD2Q8N5K1 135 aaKnown RBP14.91□□□□□ -0.02
RTN4-204ENST00000357732 SCCPDHQ8NBX0 429 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 GAB2Q9UQC2 676 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 LOXL2Q9Y4K0 774 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 TMEM210A6NLX4 147 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 C17orf112F2Z3M2 114 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 AMBPP02760 352 aa14.91□□□□□ -0.02
RTN4-204ENST00000357732 RAC2P15153 192 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms