RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 ZNF785A8K8V0 405 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 MKRN2OSH3BPM6 223 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 P01737 135 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 CD99P14209 185 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 MFAP2P55001 183 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 OR2V2Q96R30 315 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 GOLT1BQ9Y3E0 138 aa13.48□□□□□ -0.25
TRAPPC11-202ENST00000357207 MT-ND6P03923 174 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 ZNF343Q6P1L6 599 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 OR2D3Q8NGH3 330 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 OR1B1Q8NGR6 318 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 CCL17Q92583 94 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 MARS2Q96GW9 593 aaKnown RBP13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 HEXA-AS1Q9H8Q6 139 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 CISD1Q9NZ45 108 aaKnown RBP13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 CNOT1A5YKK6 2376 aaKnown RBP13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 APCSP02743 223 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 C21orf62-AS1Q17RA5 79 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 TMEM251Q8N6I4 163 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 SMIM8Q96KF7 97 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 PXMP4Q9Y6I8 212 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 SMPD2O60906 423 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 LY6G6FQ5SQ64 297 aa13.47□□□□□ -0.25
TRAPPC11-202ENST00000357207 A0A1B0GTI1 187 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 TMEM210A6NLX4 147 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 J3QR06 171 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 HIST1H1EP10412 219 aaKnown RBP13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 VWA1Q6PCB0 445 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 MDP1Q86V88 176 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 OR4X1Q8NH49 305 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 GSN-AS1Q9NRJ2 163 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 RPRMQ9NS64 109 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 LOC101059948A0A1B0GTJ6 334 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 J3QRE1 110 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 ADAM11O75078 769 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 CRYABP02511 175 aaKnown RBP13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 LYZP61626 148 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 Q56UQ5 140 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 WASHC3Q9Y3C0 194 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 IGSF23A1L1A6 192 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 FAM90A26D6RGX4 464 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 C1QL2Q7Z5L3 287 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 STXBP6Q8NFX7 210 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 MAP1LC3CQ9BXW4 147 aa13.46□□□□□ -0.25
TRAPPC11-202ENST00000357207 ISLRO14498 428 aa13.46□□□□□ -0.26
TRAPPC11-202ENST00000357207 HPRT1P00492 218 aa13.46□□□□□ -0.26
TRAPPC11-202ENST00000357207 CELA2AP08217 269 aa13.46□□□□□ -0.26
TRAPPC11-202ENST00000357207 TPRX1Q8N7U7 411 aa13.46□□□□□ -0.26
TRAPPC11-202ENST00000357207 OR2M7Q8NG81 312 aa13.46□□□□□ -0.26
TRAPPC11-202ENST00000357207 GALNT14Q96FL9 552 aa13.46□□□□□ -0.26
TRAPPC11-202ENST00000357207 TCF21O43680 179 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 AGAP20933 346 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 SLC35B1P78383 322 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 IZUMO4Q1ZYL8 232 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 RIPPLY2Q5TAB7 128 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 MOGAT3Q86VF5 341 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 CFHR5Q9BXR6 569 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 TP53BP1Q12888 1972 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 RBKSQ9H477 322 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 HBZP02008 142 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 INO80CQ6PI98 192 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 TMEM108Q6UXF1 575 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 HARBI1Q96MB7 349 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 TP53RKQ96S44 253 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 DLL3Q9NYJ7 618 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 FREM3P0C091 2139 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 MED12Q93074 2177 aa13.45□□□□□ -0.26
TRAPPC11-202ENST00000357207 GREB1Q4ZG55 1949 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 MNX1P50219 401 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 TNXAQ16473 311 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 ZNF506Q5JVG8 444 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 OR52L2PQ8NGH6 319 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 TMPRSS2O15393 492 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 SOX8P57073 446 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 ABLIM2Q6H8Q1 611 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 OR1L8Q8NGR8 309 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 DDA1Q9BW61 102 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 LCTP09848 1927 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 NCBP2LA6PVI3 153 aaKnown RBP13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 KBTBD11O94819 623 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 RPL24P83731 157 aaKnown RBP13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 GABRA6Q16445 453 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 C10orf113Q5VZT2 155 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 REC114Q7Z4M0 266 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 PARLQ9H300 379 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 CHD5Q8TDI0 1954 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 OR2H2O95918 312 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 PRSS1P07477 247 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 RIGQ13278 110 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 ZNF818PQ6ZRF7 136 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 RTBDNQ9BSG5 229 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 RNF126Q9BV68 326 aa13.44□□□□□ -0.26
TRAPPC11-202ENST00000357207 NPBWR2P48146 333 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 ASPHD2Q6ICH7 369 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 SMRP1Q8NCR6 262 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 TRAV38-1A0A0B4J264 116 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 TMEM250H0YL14 139 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 ZNHIT1O43257 154 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 PPOXP50336 477 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 PRRX1P54821 245 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms