RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MKRN2OSH3BPM6 223 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 RBMXL2O75526 392 aaKnown RBP8.58□□□□□ -1.04
PTPRA-203ENST00000356147 KBTBD11O94819 623 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 FGF5P12034 268 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 CA6P23280 308 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 FKBP2P26885 142 aaKnown RBP8.58□□□□□ -1.04
PTPRA-203ENST00000356147 OTX2P32243 289 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 SPCS3P61009 180 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 HBG1P69891 147 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 HBG2P69892 147 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 PLPPR2Q96GM1 343 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 IMMP1LQ96LU5 166 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 MRPL37Q9BZE1 423 aaKnown RBP8.58□□□□□ -1.04
PTPRA-203ENST00000356147 OR51I2Q9H344 312 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 ZNF705FA8MVS1 300 aaPredicted RBP8.58□□□□□ -1.04
PTPRA-203ENST00000356147 IFNA1P01562 189 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 ZNF705DP0CH99 300 aaPredicted RBP8.58□□□□□ -1.04
PTPRA-203ENST00000356147 ZNF705BP0CI00 300 aaPredicted RBP8.58□□□□□ -1.04
PTPRA-203ENST00000356147 NPPCP23582 126 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 GDF1P27539 372 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 S100GP29377 79 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 NUTF2P61970 127 aaKnown RBP8.58□□□□□ -1.04
PTPRA-203ENST00000356147 TDRG1Q3Y452 100 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 TRIM61Q5EBN2 209 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 OR10G9Q8NGN4 311 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 OR10G7Q8NGN6 311 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 IL22RA2Q969J5 263 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 SDSLQ96GA7 329 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 ABHD14BQ96IU4 210 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 DEPPQ9NTK1 212 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 DLL3Q9NYJ7 618 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 TRAPPC2LQ9UL33 140 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 ZNF320A2RRD8 509 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 KLF7O75840 302 aaPredicted RBP8.58□□□□□ -1.04
PTPRA-203ENST00000356147 CELA3AP09093 270 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 MPLP40238 635 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 PSMB3P49720 205 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 C3AR1Q16581 482 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 FFAR4Q5NUL3 377 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 FGFRL1Q8N441 504 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 OR2T10Q8NGZ9 312 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 REPIN1Q9BWE0 567 aaKnown RBP8.58□□□□□ -1.04
PTPRA-203ENST00000356147 C1QTNF5Q9BXJ0 243 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 CTDSP1Q9GZU7 261 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 TP53TG5Q9Y2B4 290 aa8.58□□□□□ -1.04
PTPRA-203ENST00000356147 KNTC1P50748 2209 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 LY6G6EA0A0G2JKS1 128 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 MRPL33O75394 65 aaKnown RBP8.57□□□□□ -1.04
PTPRA-203ENST00000356147 P04436 131 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 C1QTNF9P0C862 333 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 PCBD1P61457 104 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 BATFQ16520 125 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 C21orf62-AS1Q17RA5 79 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 OR1L1Q8NH94 360 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 DNASE2BQ8WZ79 361 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 NEU1Q99519 415 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 ACTR3CQ9C0K3 210 aaPredicted RBP8.57□□□□□ -1.04
PTPRA-203ENST00000356147 U3KQA8 63 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 DUXBA0A1W2PPF3 345 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 B4E171 279 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 HRASP01112 189 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 ZNF25P17030 456 aaPredicted RBP8.57□□□□□ -1.04
PTPRA-203ENST00000356147 CEACAM6P40199 344 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 TSPAN7P41732 249 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 TNFRSF9Q07011 255 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 CEACAM21Q3KPI0 293 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 TCEAL6Q6IPX3 200 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 TUSC5Q8IXB3 177 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 ZNF114Q8NC26 417 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 IMMP2LQ96T52 175 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 P2RX4Q99571 388 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 SF3B5Q9BWJ5 86 aaKnown RBP8.57□□□□□ -1.04
PTPRA-203ENST00000356147 MSL2Q9HCI7 577 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 IL17BQ9UHF5 180 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 SVILO95425 2214 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 KIAA1549Q9HCM3 1950 aa8.57□□□□□ -1.04
PTPRA-203ENST00000356147 TRAV38-1A0A0B4J264 116 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 DEGS1O15121 323 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 ZG16O60844 167 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 PAX1P15863 534 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 IL3RAP26951 378 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 GCH1P30793 250 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 ATP5G3P48201 142 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 SERF2P84101 59 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 KRTAP27-1Q3LI81 207 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 SPINK14Q6IE38 97 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 ZNF705AQ6ZN79 300 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-203ENST00000356147 MCEMP1Q8IX19 187 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 FAM58AQ8N1B3 248 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 TMEM170AQ8WVE7 144 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 TMEM18Q96B42 140 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 TMEM9BQ9NQ34 198 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 CEP192Q8TEP8 1941 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 PDGFBP01127 241 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-203ENST00000356147 CTXN2P0C2S0 81 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 SRFP11831 508 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 THBS3P49746 956 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 TGFBR3Q03167 851 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 DRAM1Q8N682 238 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 RNASEH2CQ8TDP1 164 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms