RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 FBXO7Q9Y3I1 522 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 LOC100506127A0A0U1RQW1 187 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 UBE2QL1A1L167 161 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 FAM90A10PA6NDY2 464 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 FAM90A7PA6NKC0 464 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 FAM90A23PA8MXZ1 464 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 ARL6IP5O75915 188 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 HLA-DRB1P01911 266 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 UCHL1P09936 223 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 GALP22466 123 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 PPP1CCP36873 323 aaKnown RBP12.32□□□□□ -0.44
PDGFA-201ENST00000354513 ACTBP60709 375 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 RUNX1Q01196 453 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 MMDQ15546 238 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 TIMM50Q3ZCQ8 353 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 HSD17B12Q53GQ0 312 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 AWAT2Q6E213 333 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 ZNF833PQ6ZTB9 187 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 ABHD14AQ9BUJ0 271 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 FUNDC2Q9BWH2 189 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 SELENOIQ9C0D9 397 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 WSB1Q9Y6I7 421 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 CSMD3Q7Z407 3707 aa12.32□□□□□ -0.44
PDGFA-201ENST00000354513 MAS1P04201 325 aa12.31□□□□□ -0.44
PDGFA-201ENST00000354513 CALRP27797 417 aaKnown RBP12.31□□□□□ -0.44
PDGFA-201ENST00000354513 BLVRBP30043 206 aaPredicted RBP12.31□□□□□ -0.44
PDGFA-201ENST00000354513 OR3A3P47888 321 aa12.31□□□□□ -0.44
PDGFA-201ENST00000354513 ZNF260Q3ZCT1 412 aa12.31□□□□□ -0.44
PDGFA-201ENST00000354513 STEAP3Q658P3 488 aa12.31□□□□□ -0.44
PDGFA-201ENST00000354513 C22orf42Q6IC83 251 aa12.31□□□□□ -0.44
PDGFA-201ENST00000354513 TRAT1Q6PIZ9 186 aa12.31□□□□□ -0.44
PDGFA-201ENST00000354513 CDH26Q8IXH8 852 aa12.31□□□□□ -0.44
PDGFA-201ENST00000354513 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
PDGFA-201ENST00000354513 OR51J1Q9H342 316 aa12.31□□□□□ -0.44
PDGFA-201ENST00000354513 OR2S2Q9NQN1 319 aa12.31□□□□□ -0.44
PDGFA-201ENST00000354513 TXNL4BQ9NX01 149 aaKnown RBP12.31□□□□□ -0.44
PDGFA-201ENST00000354513 JPT1Q9UK76 154 aa12.31□□□□□ -0.44
PDGFA-201ENST00000354513 ZNF256Q9Y2P7 627 aaPredicted RBP12.31□□□□□ -0.44
PDGFA-201ENST00000354513 STARD9Q9P2P6 4700 aa12.31□□□□□ -0.44
PDGFA-201ENST00000354513 SAA2-SAA4A0A096LPE2 208 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 AIREO43918 545 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 SOX15O60248 233 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 PDCD6O75340 191 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 CA11O75493 328 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 NDUFA3O95167 84 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 GLAP06280 429 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 SAA2P0DJI9 122 aaPredicted RBP12.3□□□□□ -0.44
PDGFA-201ENST00000354513 SNRPBP14678 240 aaKnown RBP12.3□□□□□ -0.44
PDGFA-201ENST00000354513 SRMP19623 302 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 FUT3P21217 361 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 FGF9P31371 208 aaPredicted RBP12.3□□□□□ -0.44
PDGFA-201ENST00000354513 HMGN3Q15651 99 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 GPR107Q5VW38 600 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 FAM46BQ96A09 425 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 OR5B12Q96R08 314 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 SULT4A1Q9BR01 284 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 ZNF251Q9BRH9 671 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 ALX4Q9H161 411 aaPredicted RBP12.3□□□□□ -0.44
PDGFA-201ENST00000354513 IFI27L2Q9H2X8 130 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 KCNK15Q9H427 330 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 PARP11Q9NR21 331 aa12.3□□□□□ -0.44
PDGFA-201ENST00000354513 NBR2O15453 112 aa12.29□□□□□ -0.44
PDGFA-201ENST00000354513 CRTAPO75718 401 aaPredicted RBP12.29□□□□□ -0.44
PDGFA-201ENST00000354513 MYL9P24844 172 aa12.29□□□□□ -0.44
PDGFA-201ENST00000354513 CHATP28329 748 aa12.29□□□□□ -0.44
PDGFA-201ENST00000354513 LSM3P62310 102 aaKnown RBP12.29□□□□□ -0.44
PDGFA-201ENST00000354513 HTD2P86397 168 aa12.29□□□□□ -0.44
PDGFA-201ENST00000354513 C5orf64Q2M2E5 130 aa12.29□□□□□ -0.44
PDGFA-201ENST00000354513 LY6G6FQ5SQ64 297 aa12.29□□□□□ -0.44
PDGFA-201ENST00000354513 ZNF554Q86TJ5 538 aa12.29□□□□□ -0.44
PDGFA-201ENST00000354513 MINDY2Q8NBR6 621 aa12.29□□□□□ -0.44
PDGFA-201ENST00000354513 NPBQ8NG41 125 aa12.29□□□□□ -0.44
PDGFA-201ENST00000354513 OR1N2Q8NGR9 330 aa12.29□□□□□ -0.44
PDGFA-201ENST00000354513 PARP12Q9H0J9 701 aaKnown RBP12.29□□□□□ -0.44
PDGFA-201ENST00000354513 RAB9BQ9NP90 201 aa12.29□□□□□ -0.44
PDGFA-201ENST00000354513 TPSG1Q9NRR2 321 aa12.29□□□□□ -0.44
PDGFA-201ENST00000354513 SORL1Q92673 2214 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 TRAV41A0A0B4J266 112 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 YPEL1O60688 119 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 OR8U8P0C7N1 319 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 OR5H8P0DN80 308 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 CRIP2P52943 208 aaPredicted RBP12.28□□□□□ -0.44
PDGFA-201ENST00000354513 ZNF616Q08AN1 781 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 OR10K2Q6IF99 312 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 LRRTM1Q86UE6 522 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 ANKRD13BQ86YJ7 626 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 CLVS1Q8IUQ0 354 aaPredicted RBP12.28□□□□□ -0.44
PDGFA-201ENST00000354513 DCUN1D4Q92564 292 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 YPEL2Q96QA6 119 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 CENPOQ9BU64 300 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 NAA50Q9GZZ1 169 aaKnown RBP12.28□□□□□ -0.44
PDGFA-201ENST00000354513 RNF167Q9H6Y7 350 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 VSIG4Q9Y279 399 aa12.28□□□□□ -0.44
PDGFA-201ENST00000354513 DNAH1Q9P2D7 4330 aa12.27□□□□□ -0.44
PDGFA-201ENST00000354513 TRAV1-2A0A0B4J238 106 aa12.27□□□□□ -0.45
PDGFA-201ENST00000354513 EGR2P11161 476 aaPredicted RBP12.27□□□□□ -0.45
PDGFA-201ENST00000354513 RAB9AP51151 201 aa12.27□□□□□ -0.45
PDGFA-201ENST00000354513 ZNF880Q6PDB4 577 aa12.27□□□□□ -0.45
PDGFA-201ENST00000354513 NKAIN3Q8N8D7 197 aa12.27□□□□□ -0.45
PDGFA-201ENST00000354513 CASTOR1Q8WTX7 329 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms