RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 TMEM167BQ9NRX6 74 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 CACFD1Q9UGQ2 172 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 MRM2Q9UI43 246 aaKnown RBP8.69□□□□□ -1.02
COL11A1-201ENST00000353414 SRD5A1P18405 259 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 ATP5G2Q06055 141 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 FXYD3Q14802 87 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 CDCP2Q5VXM1 449 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 MRPL24Q96A35 216 aaKnown RBP8.69□□□□□ -1.02
COL11A1-201ENST00000353414 TOMM7Q9P0U1 55 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 DTX4Q9Y2E6 619 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 ASPDHA6ND91 283 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 CD74P04233 296 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 AMY1AP04745 511 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 GPX1P07203 203 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 RCC1P18754 421 aaPredicted RBP8.68□□□□□ -1.02
COL11A1-201ENST00000353414 LRRC75BQ2VPJ9 315 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 OR52M1Q8NGK5 317 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 SLC35B3Q9H1N7 401 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 MPC2O95563 127 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 CX3CL1P78423 397 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 C11orf91Q3C1V1 193 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 DCAF12L2Q5VW00 463 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 FOCADQ5VW36 1801 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 LOC105371242A0A075B767 164 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 C21orf140B9A014 251 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 TMEM50BP56557 158 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 C3orf36Q3SXR2 165 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 FBXW9Q5XUX1 488 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 RTTNQ86VV8 2226 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 TRBV5-4A0A0C4DH59 114 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 SLC25A17O43808 307 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 SLC25A1P53007 311 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 HLA-DRB3P79483 266 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 PRSS42Q7Z5A4 293 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 SMIM4Q8WVI0 70 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 RAX2Q96IS3 184 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 TMEM191AQ9H0A3 160 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 SLC52A3Q9NQ40 469 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 MPC1Q9Y5U8 109 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 HIST1H1BP16401 226 aaKnown RBP8.68□□□□□ -1.02
COL11A1-201ENST00000353414 UCP2P55851 309 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 RALGAPA1Q6GYQ0 2036 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 YLPM1P49750 1951 aaKnown RBP8.68□□□□□ -1.02
COL11A1-201ENST00000353414 C7orf71A4D174 169 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 LY6DQ14210 128 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 MBNL2Q5VZF2 373 aaKnown RBP8.68□□□□□ -1.02
COL11A1-201ENST00000353414 C9orf40Q8IXQ3 194 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 OR5AU1Q8NGC0 362 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 ZNF418Q8TF45 676 aaPredicted RBP8.68□□□□□ -1.02
COL11A1-201ENST00000353414 GMPPAQ96IJ6 420 aaPredicted RBP8.68□□□□□ -1.02
COL11A1-201ENST00000353414 TMEM38BQ9NVV0 291 aa8.68□□□□□ -1.02
COL11A1-201ENST00000353414 COL18A1P39060 1754 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 CKS2P33552 79 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 RELQ04864 619 aaPredicted RBP8.67□□□□□ -1.02
COL11A1-201ENST00000353414 C2orf83Q53S99 150 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 ZNF343Q6P1L6 599 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 ZDHHC22Q8N966 263 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 ASB5Q8WWX0 329 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 LAMTOR1Q6IAA8 161 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 CBLN2Q8IUK8 224 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 RPS4Y2Q8TD47 263 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 EXOGQ9Y2C4 368 aaKnown RBP8.67□□□□□ -1.02
COL11A1-201ENST00000353414 PRR32B1ATL7 298 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 SUMO2P61956 95 aaKnown RBP8.67□□□□□ -1.02
COL11A1-201ENST00000353414 TEPPQ6URK8 271 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 VN1R4Q7Z5H5 301 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 OR4D11Q8NGI4 311 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 AKIP1Q9NQ31 210 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 SIAH2O43255 324 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 LMX1BO60663 402 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 F12P00748 615 aaPredicted RBP8.67□□□□□ -1.02
COL11A1-201ENST00000353414 PPYP01298 95 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 CRYBB2P43320 205 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 KLF9Q13886 244 aaPredicted RBP8.67□□□□□ -1.02
COL11A1-201ENST00000353414 ISXQ2M1V0 245 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 ABLIM2Q6H8Q1 611 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 ZNF770Q6IQ21 691 aaPredicted RBP8.67□□□□□ -1.02
COL11A1-201ENST00000353414 TMEM56-RWDD3S4R434 201 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 TCF20Q9UGU0 1960 aaKnown RBP8.67□□□□□ -1.02
COL11A1-201ENST00000353414 DIDO1Q9BTC0 2240 aaKnown RBP8.67□□□□□ -1.02
COL11A1-201ENST00000353414 PPIAL4CA0A0B4J2A2 164 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 HBZP02008 142 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 PPIAL4GP0DN37 164 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 PCMT1P22061 227 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 ACSF3Q4G176 576 aaPredicted RBP8.67□□□□□ -1.02
COL11A1-201ENST00000353414 ADTRPQ96IZ2 230 aa8.67□□□□□ -1.02
COL11A1-201ENST00000353414 ISG15P05161 165 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 INHBBP09529 407 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 HIST1H1AQ02539 215 aaPredicted RBP8.66□□□□□ -1.02
COL11A1-201ENST00000353414 ARRDC1Q8N5I2 433 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 SMRP1Q8NCR6 262 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 AQP10Q96PS8 301 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 PNKDQ8N490 385 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 MANBALQ9NQG1 85 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 THSD7AQ9UPZ6 1657 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 DIRC3C9JPN6 131 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 LHX2P50458 406 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 ZIC1Q15915 447 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 CXorf66Q5JRM2 361 aaPredicted RBP8.66□□□□□ -1.02
COL11A1-201ENST00000353414 CCDC144NLQ6NUI1 221 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms