RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SELENOTP62341 195 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 OR8B8Q15620 311 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 VHLLQ6RSH7 139 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 PARM1Q6UWI2 310 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 MRPL52Q86TS9 123 aaKnown RBP6.51□□□□□ -1.37
BRCA1-201ENST00000352993 ADPRHL1Q8NDY3 354 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 CDH23Q9H251 3354 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 KIR2DS1A0A191URI9 304 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 NKX6-3A6NJ46 265 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 SNURFLB1AK76 121 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 SH2D1BO14796 132 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 DRD1P21728 446 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 KIR2DS4P43632 304 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 BLKP51451 505 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 FUT6P51993 359 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 KIR2DS1Q14954 304 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 SPINK9Q5DT21 86 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 Q6ZPA2 131 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 RABEPKQ7Z6M1 372 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 LINC01551Q86U37 167 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 HAPLN4Q86UW8 402 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 OR10G3Q8NGC4 313 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 OR10G8Q8NGN5 311 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF837Q96EG3 531 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-201ENST00000352993 MTIF3Q9H2K0 278 aaKnown RBP6.51□□□□□ -1.37
BRCA1-201ENST00000352993 BET1LQ9NYM9 111 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 IGKV3D-11A0A0A0MRZ8 115 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 SLC17A3O00476 420 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 LINC00271P0C7V0 271 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 BCL3P20749 454 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 DEFB133Q30KQ1 61 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 OR56B2PQ8NGI1 322 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 KLHDC7BQ96G42 594 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 SFRP2Q96HF1 295 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 PLSCR2Q9NRY7 297 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 ITGB1BP1O14713 200 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 VENTXO95231 258 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 CDC34P49427 236 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-201ENST00000352993 BPIFB3P59826 476 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 SLC35B1P78383 322 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 ZXDAP98168 799 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 RSPO1Q2MKA7 263 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-201ENST00000352993 PLPPR5Q32ZL2 321 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 RAET1LQ5VY80 246 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 SMIM15Q7Z3B0 74 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 C10orf35Q96D05 121 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 UCN2Q96RP3 112 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 ELOVL5Q9NYP7 299 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 FBXL7Q9UJT9 491 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 TBL2Q9Y4P3 447 aaKnown RBP6.5□□□□□ -1.37
BRCA1-201ENST00000352993 PCDH15Q96QU1 1955 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 OR6C6A6NF89 314 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 G3V3Y1 287 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 M0QZ24 198 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 B4GALT1P15291 398 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 EDDM3BP56851 147 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 HLA-DRB5Q30154 266 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 ST6GALNAC3Q8NDV1 305 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 CLDN23Q96B33 292 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 BORCS7Q96B45 105 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF501Q96CX3 271 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-201ENST00000352993 RNF2Q99496 336 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 LRRC61Q9BV99 259 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 IL36RNQ9UBH0 155 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 CLN8Q9UBY8 286 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 NAT8BQ9UHF3 227 aa6.5□□□□□ -1.37
BRCA1-201ENST00000352993 MUC22E2RYF6 1773 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-201ENST00000352993 TRAV38-1A0A0B4J264 116 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 SPTY2D1-AS1A0A0U1RR47 76 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 GDF9O60383 454 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 NDUFB8O95169 186 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 OTX2P32243 289 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 TNFRSF4P43489 277 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 SUMO3P55854 103 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-201ENST00000352993 TFF3Q07654 80 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 UBE2V1Q13404 147 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 LYG1Q8N1E2 194 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 KLHDC1Q8N7A1 406 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF114Q8NC26 417 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 OR10P1Q8NGE3 313 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 OR1L3Q8NH93 324 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 ALKBH3Q96Q83 286 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF253O75346 499 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 SLC25A6P12236 298 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 CTSSP25774 331 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 GNB1P62873 340 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 KCNMB1Q16558 191 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF295-AS1Q8N0V1 137 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 FAM58AQ8N1B3 248 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 OR1F12Q8NHA8 337 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF596Q8TC21 504 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 SZT2Q5T011 3432 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 THADAQ6YHU6 1953 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 A8MXE2 369 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 C3orf80F5H4A9 247 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 TRAPPC2LH3BP13 241 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 CTXN2P0C2S0 81 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF32P17041 273 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 NPPCP23582 126 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 CDKN1BP46527 198 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms