RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 FAM90A24PP0C7X0 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 PGA5P0DJD9 388 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 RAB5AP20339 215 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 PTAFRP25105 342 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 KIR2DL2P43627 348 aaPredicted RBP5.06□□□□□ -1.6
CLCN3-201ENST00000347613 GLIPR1P48060 266 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 PPP1CBP62140 327 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FABP9Q0Z7S8 132 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 GABRA6Q16445 453 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 SRSF7Q16629 238 aaKnown RBP eCLIP5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A2PQ658T7 463 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FGFRL1Q8N441 504 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 KDF1Q8NAX2 398 aaPredicted RBP5.06□□□□□ -1.6
CLCN3-201ENST00000347613 KLF14Q8TD94 323 aaPredicted RBP5.06□□□□□ -1.6
CLCN3-201ENST00000347613 ABHD14BQ96IU4 210 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 GPR87Q9BY21 358 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 SMCO4Q9NRQ5 59 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 ATPIF1Q9UII2 106 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 PLCE1Q9P212 2302 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 MAP1BP46821 2468 aaKnown RBP5.06□□□□□ -1.6
CLCN3-201ENST00000347613 CEP295Q9C0D2 2601 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 DSCAML1Q8TD84 2053 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 TRBV6-6A0A0A6YYG2 114 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 TRGV5A0A0B4J1U4 118 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 ANKRD30BLA7E2S9 258 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 LINC00587B1AMM8 73 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 EGR1P18146 543 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 APLNRP35414 380 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 ARR3P36575 388 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 CCL11P51671 97 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF816Q0VGE8 651 aaPredicted RBP5.06□□□□□ -1.6
CLCN3-201ENST00000347613 ELOBQ15370 118 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 GUSBP1Q15486 140 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM201AQ5SY85 155 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 LCN15Q6UWW0 184 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 HEPN1Q6WQI6 88 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 SPNS3Q6ZMD2 512 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF525Q8N782 197 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 C15orf54Q8N8G6 183 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 Q8TCH9 128 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 MEGF10Q96KG7 1140 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 TECTBQ96PL2 329 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 OR4C12Q96R67 309 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 STRADBQ9C0K7 418 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 PARD6AQ9NPB6 346 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 MBNL3Q9NUK0 354 aaKnown RBP5.06□□□□□ -1.6
CLCN3-201ENST00000347613 DKK4Q9UBT3 224 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 CLN8Q9UBY8 286 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 KPTNQ9Y664 436 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 RIF1Q5UIP0 2472 aaKnown RBP5.06□□□□□ -1.6
CLCN3-201ENST00000347613 TRBV23-1A0A0A0MS06 115 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 BORCS7-ASMTA0A0B4J1R7 106 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 SPAARA0A1B0GVQ0 90 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 PMS2P5A8MQ11 134 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 HOXB1P14653 301 aaPredicted RBP5.05□□□□□ -1.6
CLCN3-201ENST00000347613 BMP5P22003 454 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 OR3A1P47881 315 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 MEOX2P50222 304 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 TNFSF10P50591 281 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF134P52741 427 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 DLK1P80370 383 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 EIF2S3LQ2VIR3 472 aaKnown RBP5.05□□□□□ -1.6
CLCN3-201ENST00000347613 EIF5AL1Q6IS14 154 aaKnown RBP5.05□□□□□ -1.6
CLCN3-201ENST00000347613 RPP25LQ8N5L8 163 aaKnown RBP5.05□□□□□ -1.6
CLCN3-201ENST00000347613 Q8N7P7 452 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 OR1J1Q8NGS3 322 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 TAAR6Q96RI8 345 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 TRIB1Q96RU8 372 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 TRAPPC2LQ9UL33 140 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 MAP1AP78559 2803 aaPredicted RBP5.05□□□□□ -1.6
CLCN3-201ENST00000347613 PCNX1Q96RV3 2341 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 C21orf140B9A014 251 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 UBE2CO00762 179 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 S1PR2O95136 353 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 KRASP01116 189 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 P0C879 139 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF883P0CG24 379 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 RD3LP0DJH9 198 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 FABP6P51161 128 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 ARG2P78540 354 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF146Q15072 292 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 LTC4SQ16873 150 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 GCSAMLQ5JQS6 135 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 ACSM6Q6P461 480 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF573Q86YE8 665 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 VKORC1L1Q8N0U8 176 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 CD177Q8N6Q3 437 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 OR13A1Q8NGR1 328 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 MRGPRDQ8TDS7 321 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 ATP5SQ99766 215 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 SEBOXQ9HB31 216 aaPredicted RBP5.05□□□□□ -1.6
CLCN3-201ENST00000347613 HES4Q9HCC6 221 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 CLCF1Q9UBD9 225 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 CELSR2Q9HCU4 2923 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 CRYBG3Q68DQ2 2970 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 J3QT63 122 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 MMP9P14780 707 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 TAS2R30P59541 319 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 RAB2AP61019 212 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 TFF3Q07654 80 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms