RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 VAX1Q5SQQ9 334 aa11.21□□□□□ -0.61
TPM4-202ENST00000344824 C1orf122Q6ZSJ8 110 aa11.21□□□□□ -0.61
TPM4-202ENST00000344824 OVCH2Q7RTZ1 564 aa11.21□□□□□ -0.61
TPM4-202ENST00000344824 OR52L2PQ8NGH6 319 aa11.21□□□□□ -0.61
TPM4-202ENST00000344824 OR10J5Q8NHC4 309 aa11.21□□□□□ -0.61
TPM4-202ENST00000344824 CORO2AQ92828 525 aa11.21□□□□□ -0.61
TPM4-202ENST00000344824 ZNF2Q9BSG1 426 aaPredicted RBP11.21□□□□□ -0.61
TPM4-202ENST00000344824 CABLES2Q9BTV7 478 aa11.21□□□□□ -0.61
TPM4-202ENST00000344824 GAL3ST2Q9H3Q3 398 aa11.21□□□□□ -0.61
TPM4-202ENST00000344824 ZNRD1Q9P1U0 126 aa11.21□□□□□ -0.61
TPM4-202ENST00000344824 KBTBD11-OT1A0A1B0GTJ5 212 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 FAM181BA6NEQ2 426 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 IGHV3-7P01780 117 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 ZNF728P0DKX0 622 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 HKR1P10072 659 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 PAX6P26367 422 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 FCGR2CP31995 323 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 FXYD4P59646 89 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 FOXL1Q12952 345 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 PLA1AQ53H76 456 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 HCP5Q6MZN7 132 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 NRARPQ7Z6K4 114 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 TMEM17Q86X19 198 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 LDLRAD3Q86YD5 345 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 C17orf50Q8WW18 174 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 DPAGT1Q9H3H5 408 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 PRDM13Q9H4Q3 707 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 UNKLQ9H9P5 680 aaKnown RBP11.2□□□□□ -0.62
TPM4-202ENST00000344824 TAS2R3Q9NYW6 316 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 IDI2-AS1Q9NZ38 188 aa11.2□□□□□ -0.62
TPM4-202ENST00000344824 MMP23AO75900 390 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 ARG1P05089 322 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 CTXN2P0C2S0 81 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 CGB3P0DN86 165 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 CGB7P0DN87 165 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 AADACP22760 399 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 PPP1CCP36873 323 aaKnown RBP11.19□□□□□ -0.62
TPM4-202ENST00000344824 CEACAM6P40199 344 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 HERV-K104P61576 105 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 IDO2Q6ZQW0 420 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 TMEM86BQ8N661 226 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 OR6F1Q8NGZ6 308 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 DEDD2Q8WXF8 326 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 LEAP2Q969E1 77 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 TOMM40LQ969M1 308 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 OR2S2Q9NQN1 319 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 GNG12Q9UBI6 72 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 SCP2D1Q9UJQ7 156 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 POMT1Q9Y6A1 747 aa11.19□□□□□ -0.62
TPM4-202ENST00000344824 TRBV6-7A0A0A0MS04 114 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 GPR137BO60478 399 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 PTTG1O95997 202 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 IGHV1-8P0DP01 117 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 IER3P46695 156 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 DLX6P56179 175 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 LY6EQ16553 131 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 TRIM16LQ309B1 348 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 ZNF554Q86TJ5 538 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 ARRDC1Q8N5I2 433 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 OR13D1Q8NGV5 346 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 PRRT1Q99946 306 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 PARP12Q9H0J9 701 aaKnown RBP11.18□□□□□ -0.62
TPM4-202ENST00000344824 MMP28Q9H239 520 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 RAB9BQ9NP90 201 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 RDH8Q9NYR8 311 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 OR5H14A6NHG9 310 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 C17orf98A8MV24 154 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 NPIPB11E5RHQ5 1161 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 H3BUX3 64 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 F2RL2O00254 374 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 DIRAS3O95661 229 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 PGAM2P15259 253 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 MDKP21741 143 aaPredicted RBP11.18□□□□□ -0.62
TPM4-202ENST00000344824 ZBTB25P24278 435 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 COMPP49747 757 aaPredicted RBP11.18□□□□□ -0.62
TPM4-202ENST00000344824 GNG10P50151 68 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 RAG2P55895 527 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 MIDNQ504T8 468 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 UTF1Q5T230 341 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 LHFPL4Q7Z7J7 247 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 H1FOOQ8IZA3 346 aaPredicted RBP11.18□□□□□ -0.62
TPM4-202ENST00000344824 C11orf42Q8N5U0 333 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 OR13C8Q8NGS7 320 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 CREB3L1Q96BA8 519 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 FXYD6Q9H0Q3 95 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 GFOD1Q9NXC2 390 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 VPREB3Q9UKI3 123 aa11.18□□□□□ -0.62
TPM4-202ENST00000344824 RBM7Q9Y580 266 aaKnown RBP11.18□□□□□ -0.62
TPM4-202ENST00000344824 TRAV6A0A075B6T7 132 aa11.17□□□□□ -0.62
TPM4-202ENST00000344824 A0A1W2PPE3 182 aa11.17□□□□□ -0.62
TPM4-202ENST00000344824 PPYP01298 95 aa11.17□□□□□ -0.62
TPM4-202ENST00000344824 SLC6A1P30531 599 aa11.17□□□□□ -0.62
TPM4-202ENST00000344824 HTD2P86397 168 aa11.17□□□□□ -0.62
TPM4-202ENST00000344824 RBMS2Q15434 407 aaKnown RBP11.17□□□□□ -0.62
TPM4-202ENST00000344824 ZNF660Q6AZW8 331 aaPredicted RBP11.17□□□□□ -0.62
TPM4-202ENST00000344824 DHRS7BQ6IAN0 325 aaPredicted RBP11.17□□□□□ -0.62
TPM4-202ENST00000344824 HEPN1Q6WQI6 88 aa11.17□□□□□ -0.62
TPM4-202ENST00000344824 CENPSQ8N2Z9 138 aa11.17□□□□□ -0.62
TPM4-202ENST00000344824 TERB2Q8NHR7 220 aa11.17□□□□□ -0.62
TPM4-202ENST00000344824 MARCH1Q8TCQ1 289 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms