RNA–Protein interactions for RNA: ENST00000344576.6

EGFR-203, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-203ENST00000344576 SPANXN5Q5MJ07 72 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 SPINK14Q6IE38 97 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 CYP2G1PQ6ZSU1 146 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 CPEB3Q8NE35 698 aaKnown RBP13.65□□□□□ -0.22
EGFR-203ENST00000344576 FOXB1Q99853 325 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 SH2D2AQ9NP31 389 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 OR1A1Q9P1Q5 309 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 HS3ST1O14792 307 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 IGKV1-5P01602 117 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 ZNF16P17020 682 aaPredicted RBP13.65□□□□□ -0.22
EGFR-203ENST00000344576 RPS16P62249 146 aaKnown RBP13.65□□□□□ -0.22
EGFR-203ENST00000344576 MEF2BQ02080 365 aaPredicted RBP13.65□□□□□ -0.22
EGFR-203ENST00000344576 SSPNQ14714 243 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 RNPS1Q15287 305 aaKnown RBP13.65□□□□□ -0.22
EGFR-203ENST00000344576 LRRC75BQ2VPJ9 315 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 TMEM41BQ5BJD5 291 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 OR8G2PQ6IF36 304 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 MRPL41Q8IXM3 137 aaKnown RBP13.65□□□□□ -0.22
EGFR-203ENST00000344576 RDH5Q92781 318 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 RAB40CQ96S21 281 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 PARLQ9H300 379 aa13.65□□□□□ -0.22
EGFR-203ENST00000344576 AURKAIP1Q9NWT8 199 aaPredicted RBP13.65□□□□□ -0.22
EGFR-203ENST00000344576 SYNGR1O43759 233 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 PAX5Q02548 391 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 TNFRSF9Q07011 255 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 TRIP6Q15654 476 aaKnown RBP13.64□□□□□ -0.23
EGFR-203ENST00000344576 KRTAP27-1Q3LI81 207 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 PSMF1Q92530 271 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 ZNF845Q96IR2 970 aaPredicted RBP13.64□□□□□ -0.23
EGFR-203ENST00000344576 ATP23Q9Y6H3 246 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 KBTBD11O94819 623 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 BMP5P22003 454 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 COA6Q5JTJ3 125 aaKnown RBP13.64□□□□□ -0.23
EGFR-203ENST00000344576 ACSM6Q6P461 480 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 Q6ZS49 121 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 PRR18Q8N4B5 295 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 ADGRG7Q96K78 797 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 WDR61Q9GZS3 305 aaKnown RBP13.64□□□□□ -0.23
EGFR-203ENST00000344576 PPP1R3CQ9UQK1 317 aa13.64□□□□□ -0.23
EGFR-203ENST00000344576 ZFHX2Q9C0A1 2572 aaPredicted RBP13.63□□□□□ -0.23
EGFR-203ENST00000344576 DSPP15924 2871 aaKnown RBP13.63□□□□□ -0.23
EGFR-203ENST00000344576 PRDX4Q13162 271 aa13.63□□□□□ -0.23
EGFR-203ENST00000344576 AAED1Q7RTV5 226 aa13.63□□□□□ -0.23
EGFR-203ENST00000344576 BEND2Q8NDZ0 799 aa13.63□□□□□ -0.23
EGFR-203ENST00000344576 OR10V1Q8NGI7 309 aa13.63□□□□□ -0.23
EGFR-203ENST00000344576 MRPL30Q8TCC3 161 aaKnown RBP13.63□□□□□ -0.23
EGFR-203ENST00000344576 TMEM170AQ8WVE7 144 aa13.63□□□□□ -0.23
EGFR-203ENST00000344576 SLC39A9Q9NUM3 307 aa13.63□□□□□ -0.23
EGFR-203ENST00000344576 GCGP01275 180 aa13.63□□□□□ -0.23
EGFR-203ENST00000344576 FKBP2P26885 142 aaKnown RBP13.63□□□□□ -0.23
EGFR-203ENST00000344576 FAM3BP58499 235 aaPredicted RBP13.63□□□□□ -0.23
EGFR-203ENST00000344576 SRSF6Q13247 344 aaKnown RBP13.63□□□□□ -0.23
EGFR-203ENST00000344576 TMEM164Q5U3C3 297 aa13.63□□□□□ -0.23
EGFR-203ENST00000344576 ZNF324BQ6AW86 544 aaPredicted RBP13.63□□□□□ -0.23
EGFR-203ENST00000344576 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.63□□□□□ -0.23
EGFR-203ENST00000344576 OR5B12Q96R08 314 aa13.63□□□□□ -0.23
EGFR-203ENST00000344576 PSMG3Q9BT73 122 aaPredicted RBP13.63□□□□□ -0.23
EGFR-203ENST00000344576 DCHS1Q96JQ0 3298 aa13.63□□□□□ -0.23
EGFR-203ENST00000344576 CD300LBA8K4G0 201 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 CXCL13O43927 109 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 COX5BP10606 129 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 DSCR4P56555 118 aaPredicted RBP13.62□□□□□ -0.23
EGFR-203ENST00000344576 FGF12P61328 243 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 LINC00696Q6ZRV3 163 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 MED12LQ86YW9 2145 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 OR4F5Q8NH21 305 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 IL22RA2Q969J5 263 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 OR4F4Q96R69 305 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 ZPBPQ9BS86 351 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 USF3Q68DE3 2245 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 KIR2DS1A0A191URI9 304 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 IFNA1P01562 189 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 P04436 131 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 EGR1P18146 543 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 KIR2DS4P43632 304 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 KIR2DS1Q14954 304 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 ACTL10Q5JWF8 245 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 OR2W1Q9Y3N9 320 aa13.62□□□□□ -0.23
EGFR-203ENST00000344576 ZNF716A6NP11 495 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 TRAPPC6AO75865 159 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 HRASP01112 189 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 IGLV2-14P01704 120 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 CD33P20138 364 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 CHRNA7P36544 502 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 WIPI1Q5MNZ9 446 aaPredicted RBP13.61□□□□□ -0.23
EGFR-203ENST00000344576 TAF15Q92804 592 aaKnown RBP eCLIP13.61□□□□□ -0.23
EGFR-203ENST00000344576 NUPR1O60356 82 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 WNT5AP41221 380 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 PDLIM4P50479 330 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 CLDN15P56746 228 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 CPT1CQ8TCG5 803 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 TMEM68Q96MH6 324 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 OR51I2Q9H344 312 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 RIF1Q5UIP0 2472 aaKnown RBP13.61□□□□□ -0.23
EGFR-203ENST00000344576 C1QTNF9BB2RNN3 333 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 IGHEP01854 428 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 RAC1P63000 192 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 SLC38A11Q08AI6 406 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 TMEM256Q8N2U0 113 aa13.61□□□□□ -0.23
EGFR-203ENST00000344576 OR10J5Q8NHC4 309 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms