RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 SULT1A1P50225 295 aa16.25■□□□□ 0.19
COL9A3-201ENST00000343916 C5orf30Q96GV9 206 aa16.25■□□□□ 0.19
COL9A3-201ENST00000343916 PBDC1Q9BVG4 233 aa16.25■□□□□ 0.19
COL9A3-201ENST00000343916 ZNF71Q9NQZ8 489 aaPredicted RBP16.25■□□□□ 0.19
COL9A3-201ENST00000343916 PTPRBP23467 1997 aa16.25■□□□□ 0.19
COL9A3-201ENST00000343916 WNT2P09544 360 aa16.25■□□□□ 0.19
COL9A3-201ENST00000343916 METTL15P1P0C7V9 234 aa16.25■□□□□ 0.19
COL9A3-201ENST00000343916 IL2RGP31785 369 aa16.25■□□□□ 0.19
COL9A3-201ENST00000343916 ADAM5Q6NVV9 412 aa16.25■□□□□ 0.19
COL9A3-201ENST00000343916 RAB40CQ96S21 281 aa16.25■□□□□ 0.19
COL9A3-201ENST00000343916 PROCRQ9UNN8 238 aa16.25■□□□□ 0.19
COL9A3-201ENST00000343916 HBZP02008 142 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 NQO2P16083 231 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 RAB5AP20339 215 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 GCH1P30793 250 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 SSTR5P35346 364 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 GLIPR1P48060 266 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 ARL16Q0P5N6 197 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 THNSL2Q86YJ6 484 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 FGFRL1Q8N441 504 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 ZNF251Q9BRH9 671 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 SLC35B3Q9H1N7 401 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 WSB1Q9Y6I7 421 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 IGLV1-44P01699 117 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 RPL30P62888 115 aaKnown RBP16.24■□□□□ 0.19
COL9A3-201ENST00000343916 ZNF718Q3SXZ3 478 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 SLC25A24Q6NUK1 477 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 RPRMLQ8N4K4 120 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 LFNGQ8NES3 379 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 GNPNAT1Q96EK6 184 aaPredicted RBP16.24■□□□□ 0.19
COL9A3-201ENST00000343916 RSG1Q9BU20 258 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 KCNJ16Q9NPI9 418 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 PSENENQ9NZ42 101 aa16.24■□□□□ 0.19
COL9A3-201ENST00000343916 ZFHX2Q9C0A1 2572 aaPredicted RBP16.24■□□□□ 0.19
COL9A3-201ENST00000343916 IGHV3-43A0A0B4J1X8 118 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 TRAV20A0A0B4J274 112 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 AHRRA9YTQ3 701 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 CGAP01215 116 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 IGHV3-43DP0DP04 118 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 KITLGP21583 273 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 COL10A1Q03692 680 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 HAGHQ16775 308 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 BTNL3Q6UXE8 466 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 ZNF645Q8N7E2 425 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 RFESDQ8TAC1 157 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 MUC6Q6W4X9 2439 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 ICE1Q9Y2F5 2266 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 LINC00205P59089 165 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 ZNF816Q0VGE8 651 aaPredicted RBP16.23■□□□□ 0.19
COL9A3-201ENST00000343916 MSMPQ1L6U9 139 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 AKR1C8PQ5T2L2 129 aa16.23■□□□□ 0.19
COL9A3-201ENST00000343916 BHLHA15Q7RTS1 189 aaPredicted RBP16.23■□□□□ 0.19
COL9A3-201ENST00000343916 OOEPA6NGQ2 149 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 KRASP01116 189 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 TAS2R30P59541 319 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 SLC35E4Q6ICL7 350 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 DCTN5Q9BTE1 182 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 SEBOXQ9HB31 216 aaPredicted RBP16.22■□□□□ 0.19
COL9A3-201ENST00000343916 CEP250Q9BV73 2442 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 DOCK11Q5JSL3 2073 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 AKAP13Q12802 2813 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 RBFOX3A6NFN3 312 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 OR5H1A6NKK0 313 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 DEFB108AA8MXU0 73 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 OR8U8P0C7N1 319 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 G6PCP35575 357 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 FAM209BQ5JX69 171 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 HAPLN4Q86UW8 402 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 LRP11Q86VZ4 500 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 ZADH2Q8N4Q0 377 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 OR2Z1Q8NG97 314 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 OR13A1Q8NGR1 328 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 METTL1Q9UBP6 276 aaKnown RBP16.22■□□□□ 0.19
COL9A3-201ENST00000343916 DUSP13Q9UII6 198 aa16.22■□□□□ 0.19
COL9A3-201ENST00000343916 PIGBOS1A0A0B4J2F0 54 aa16.21■□□□□ 0.19
COL9A3-201ENST00000343916 CEBPGP53567 150 aa16.21■□□□□ 0.19
COL9A3-201ENST00000343916 SPANXN5Q5MJ07 72 aa16.21■□□□□ 0.19
COL9A3-201ENST00000343916 CLN5O75503 358 aa16.21■□□□□ 0.18
COL9A3-201ENST00000343916 CEACAM4O75871 244 aa16.21■□□□□ 0.18
COL9A3-201ENST00000343916 DFFBO76075 338 aa16.21■□□□□ 0.18
COL9A3-201ENST00000343916 IFNA5P01569 189 aa16.21■□□□□ 0.18
COL9A3-201ENST00000343916 FBP1P09467 338 aa16.21■□□□□ 0.18
COL9A3-201ENST00000343916 CEACAM1P13688 526 aa16.21■□□□□ 0.18
COL9A3-201ENST00000343916 LRRC29Q8WV35 223 aa16.21■□□□□ 0.18
COL9A3-201ENST00000343916 NINJ1Q92982 152 aa16.21■□□□□ 0.18
COL9A3-201ENST00000343916 LRFN3Q9BTN0 628 aa16.21■□□□□ 0.18
COL9A3-201ENST00000343916 TUBA4BQ9H853 241 aa16.21■□□□□ 0.18
COL9A3-201ENST00000343916 IGHV2-5P01817 119 aa16.2■□□□□ 0.18
COL9A3-201ENST00000343916 CD200P41217 278 aa16.2■□□□□ 0.18
COL9A3-201ENST00000343916 ZNF83P51522 516 aa16.2■□□□□ 0.18
COL9A3-201ENST00000343916 EDDM3AQ14507 147 aa16.2■□□□□ 0.18
COL9A3-201ENST00000343916 LTC4SQ16873 150 aa16.2■□□□□ 0.18
COL9A3-201ENST00000343916 MBNL2Q5VZF2 373 aaKnown RBP16.2■□□□□ 0.18
COL9A3-201ENST00000343916 CD177Q8N6Q3 437 aa16.2■□□□□ 0.18
COL9A3-201ENST00000343916 PLPPR2Q96GM1 343 aa16.2■□□□□ 0.18
COL9A3-201ENST00000343916 ZMAT5Q9UDW3 170 aaKnown RBP16.2■□□□□ 0.18
COL9A3-201ENST00000343916 MIOXQ9UGB7 285 aa16.2■□□□□ 0.18
COL9A3-201ENST00000343916 PUS1Q9Y606 427 aaKnown RBP eCLIP16.2■□□□□ 0.18
COL9A3-201ENST00000343916 SLC25A15Q9Y619 301 aa16.2■□□□□ 0.18
COL9A3-201ENST00000343916 ZNF891A8MT65 544 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms