RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CRYGSP22914 178 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 PSG4Q00888 419 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 C10orf35Q96D05 121 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 BTF3L4Q96K17 158 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 RNF114Q9Y508 228 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 CACNA1DQ01668 2161 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 S100GP29377 79 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 RNF151Q2KHN1 245 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 PINX1Q96BK5 328 aaKnown RBP12.63□□□□□ -0.39
CLCN1-201ENST00000343257 OR51B6Q9H340 312 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 PXMP4Q9Y6I8 212 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 SIRPB1O00241 398 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 TNFSF13O75888 250 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 LINC00614P0C842 121 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 SRP14P37108 136 aaKnown RBP12.63□□□□□ -0.39
CLCN1-201ENST00000343257 TPTE2P1Q5T6R2 138 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 ASCL4Q6XD76 172 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 ERASQ7Z444 233 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 TMEM54Q969K7 222 aa12.63□□□□□ -0.39
CLCN1-201ENST00000343257 CIB3Q96Q77 187 aaPredicted RBP12.63□□□□□ -0.39
CLCN1-201ENST00000343257 AKIRIN1Q9H9L7 192 aaPredicted RBP12.63□□□□□ -0.39
CLCN1-201ENST00000343257 TRAV38-1A0A0B4J264 116 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 RBMXL2O75526 392 aaKnown RBP12.62□□□□□ -0.39
CLCN1-201ENST00000343257 IL6RP08887 468 aaPredicted RBP12.62□□□□□ -0.39
CLCN1-201ENST00000343257 C10orf128Q5T292 105 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 MCEMP1Q8IX19 187 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 OR56B2PQ8NGI1 322 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 DEFB126Q9BYW3 111 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 TP53TG3Q9ULZ0 132 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 C5orf67F2Z3F1 127 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 TMEM250H0YL14 139 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 SLC17A3O00476 420 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 RBFOX2O43251 390 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLCN1-201ENST00000343257 SYNGR1O43759 233 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 MSX1P28360 303 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 GAGE1Q13065 139 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 TMEM183BQ1AE95 376 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 LINC01551Q86U37 167 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 ZIC4Q8N9L1 334 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 CLDN23Q96B33 292 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 ASCL3Q9NQ33 180 aa12.62□□□□□ -0.39
CLCN1-201ENST00000343257 IGHV1OR21-1A0A087WYE8 117 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 hCG_38984A0A1B0GV85 526 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 KRASP01116 189 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 TPPP2P59282 170 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 GNB1P62873 340 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 FAM27BQ5VT28 67 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 ATOH7Q8N100 152 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 SRXN1Q9BYN0 137 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 HIPK2Q9H2X6 1198 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 CTXND1A0A1B0GTU2 59 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 SLC25A53Q5H9E4 307 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 PCSK4Q6UW60 755 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 STPG4Q8N801 248 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 OR6C1Q96RD1 312 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 A0A0J9YW62 118 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 LOC102725191A0A1B0GVB3 256 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 SH2D1BO14796 132 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 ZFAND5O76080 213 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 SERPINA7P05543 415 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 UMODP07911 640 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 PTTG1IPP53801 180 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 KIAA1644Q3SXP7 199 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 NUFIP2Q7Z417 695 aaKnown RBP12.61□□□□□ -0.39
CLCN1-201ENST00000343257 CENPVQ7Z7K6 275 aaPredicted RBP12.61□□□□□ -0.39
CLCN1-201ENST00000343257 FGF23Q9GZV9 251 aaPredicted RBP12.61□□□□□ -0.39
CLCN1-201ENST00000343257 MTCH1Q9NZJ7 389 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 OR2W1Q9Y3N9 320 aa12.61□□□□□ -0.39
CLCN1-201ENST00000343257 CRISP2P16562 243 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 ZNF816Q0VGE8 651 aaPredicted RBP12.6□□□□□ -0.39
CLCN1-201ENST00000343257 MSMO1Q15800 293 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 CEACAM16Q2WEN9 425 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 COL5A1-AS1Q5SY13 56 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 FAM53AQ6NSI3 398 aaPredicted RBP12.6□□□□□ -0.39
CLCN1-201ENST00000343257 CADM4Q8NFZ8 388 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 DOCK7Q96N67 2140 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 ATP23Q9Y6H3 246 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 KIR2DS1A0A191URI9 304 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 TYMSP04818 313 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 KIR2DS4P43632 304 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 SOX8P57073 446 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 LINC00310P59036 64 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 ZNF90Q03938 601 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 KIR2DS1Q14954 304 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 OR5AU1Q8NGC0 362 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 OR1L1Q8NH94 360 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 ZDHHC16Q969W1 377 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 TXN2Q99757 166 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 CRISPLD2Q9H0B8 497 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 ELOVL5Q9NYP7 299 aa12.6□□□□□ -0.39
CLCN1-201ENST00000343257 A0A096LPE4 126 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 A0A1W2PPZ6 126 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 KITLGP21583 273 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 SLC35B1P78383 322 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 RHBDD2Q6NTF9 364 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 SPACA9Q96E40 222 aaPredicted RBP12.59□□□□□ -0.39
CLCN1-201ENST00000343257 MDFIC2A0A1B0GVS7 189 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 WNT2P09544 360 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 PMCHP20382 165 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 G6PCP35575 357 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms