RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 GCH1P30793 250 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 AKR1C3P42330 323 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 CA7P43166 264 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 RPL23AP62750 156 aaKnown RBP12.58□□□□□ -0.39
TPM3-208ENST00000341485 TMEM267Q0VDI3 215 aaPredicted RBP12.58□□□□□ -0.39
TPM3-208ENST00000341485 PRAMEF6Q5VXH4 476 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 FIP1L1Q6UN15 594 aaKnown RBP12.58□□□□□ -0.39
TPM3-208ENST00000341485 Q6ZR03 302 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 OR1L1Q8NH94 360 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 GNPNAT1Q96EK6 184 aaPredicted RBP12.58□□□□□ -0.39
TPM3-208ENST00000341485 RAB40CQ96S21 281 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 CXXC4Q9H2H0 198 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 SMCO4Q9NRQ5 59 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 LIN7CQ9NUP9 197 aaKnown RBP12.58□□□□□ -0.39
TPM3-208ENST00000341485 FZR1Q9UM11 496 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.58□□□□□ -0.4
TPM3-208ENST00000341485 TMEM30CPA0ZSE6 113 aa12.58□□□□□ -0.4
TPM3-208ENST00000341485 CRYAAP02489 173 aa12.58□□□□□ -0.4
TPM3-208ENST00000341485 TFF1P04155 84 aa12.58□□□□□ -0.4
TPM3-208ENST00000341485 C3orf36Q3SXR2 165 aa12.58□□□□□ -0.4
TPM3-208ENST00000341485 ZNF718Q3SXZ3 478 aa12.58□□□□□ -0.4
TPM3-208ENST00000341485 AWAT1Q58HT5 328 aa12.58□□□□□ -0.4
TPM3-208ENST00000341485 C1orf174Q8IYL3 243 aa12.58□□□□□ -0.4
TPM3-208ENST00000341485 SLC35B3Q9H1N7 401 aa12.58□□□□□ -0.4
TPM3-208ENST00000341485 JKAMPQ9P055 326 aa12.58□□□□□ -0.4
TPM3-208ENST00000341485 NDUFA2O43678 99 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 CRYBA1P05813 215 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 IAPPP10997 89 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 OR3A1P47881 315 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 SULT1A1P50225 295 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 SP5Q6BEB4 398 aaPredicted RBP12.57□□□□□ -0.4
TPM3-208ENST00000341485 FAM53AQ6NSI3 398 aaPredicted RBP12.57□□□□□ -0.4
TPM3-208ENST00000341485 ACP7Q6ZNF0 438 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 STX12Q86Y82 276 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 CLCC1Q96S66 551 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 RARRES2Q99969 163 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 SAV1Q9H4B6 383 aaPredicted RBP12.57□□□□□ -0.4
TPM3-208ENST00000341485 ESRP2Q9H6T0 727 aaKnown RBP12.57□□□□□ -0.4
TPM3-208ENST00000341485 RPS10P5Q9NQ39 176 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 ATMQ13315 3056 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 PRRC2CQ9Y520 2896 aaKnown RBP12.57□□□□□ -0.4
TPM3-208ENST00000341485 A6NLC8 198 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 C12orf77C9JDV5 145 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 TIMM8AO60220 97 aaPredicted RBP12.57□□□□□ -0.4
TPM3-208ENST00000341485 KITLGP21583 273 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 CCKARP32238 428 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 FABP6P51161 128 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 SLC35E4Q6ICL7 350 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 KCNIP1Q9NZI2 227 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 WSB1Q9Y6I7 421 aa12.57□□□□□ -0.4
TPM3-208ENST00000341485 PIEZO2Q9H5I5 2752 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 C7orf77A4D0Y5 90 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 CCL21O00585 134 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 SYNGR2O43760 224 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 DFFBO76075 338 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 SNRNP70P08621 437 aaKnown RBP12.56□□□□□ -0.4
TPM3-208ENST00000341485 OR13C7P0DN81 318 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 CD200P41217 278 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 TAS2R30P59541 319 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 AESQ08117 197 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 AVPI1Q5T686 147 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 WDR82Q6UXN9 313 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 C5orf30Q96GV9 206 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 COQ2Q96H96 371 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 MSL2Q9HCI7 577 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 UFSP2Q9NUQ7 469 aa12.56□□□□□ -0.4
TPM3-208ENST00000341485 AKR1C8PQ5T2L2 129 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 ZNF645Q8N7E2 425 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 OR52L2PQ8NGH6 319 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 C14orf79Q96F83 325 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 C20orf24Q9BUV8 137 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 KCNJ16Q9NPI9 418 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 PSENENQ9NZ42 101 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 RNF150Q9ULK6 438 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 NCOR2Q9Y618 2525 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 RBFOX3A6NFN3 312 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 M0R036 132 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 PTBP3O95758 552 aaKnown RBP12.55□□□□□ -0.4
TPM3-208ENST00000341485 HBZP02008 142 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 PAX6P26367 422 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 ARL16Q0P5N6 197 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 MBNL2Q5VZF2 373 aaKnown RBP12.55□□□□□ -0.4
TPM3-208ENST00000341485 HAPLN4Q86UW8 402 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 WFDC8Q8IUA0 241 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 C15orf54Q8N8G6 183 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 PRR7Q8TB68 274 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 GALMQ96C23 342 aa12.55□□□□□ -0.4
TPM3-208ENST00000341485 BTBD17A6NE02 478 aa12.54□□□□□ -0.4
TPM3-208ENST00000341485 OOEPA6NGQ2 149 aa12.54□□□□□ -0.4
TPM3-208ENST00000341485 RNF212BA8MTL3 300 aa12.54□□□□□ -0.4
TPM3-208ENST00000341485 IFNA5P01569 189 aa12.54□□□□□ -0.4
TPM3-208ENST00000341485 RAB13P51153 203 aa12.54□□□□□ -0.4
TPM3-208ENST00000341485 EIF4EBP1Q13541 118 aaPredicted RBP12.54□□□□□ -0.4
TPM3-208ENST00000341485 THNSL2Q86YJ6 484 aa12.54□□□□□ -0.4
TPM3-208ENST00000341485 FGFRL1Q8N441 504 aa12.54□□□□□ -0.4
TPM3-208ENST00000341485 OR2D2Q9H210 308 aa12.54□□□□□ -0.4
TPM3-208ENST00000341485 KIAA1456Q9P272 454 aa12.54□□□□□ -0.4
TPM3-208ENST00000341485 METTL15P1P0C7V9 234 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 IL2RGP31785 369 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms