RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 T-ENOLP0DO92 83 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 H2AFXP16104 143 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-201ENST00000340660 UBE2V2Q15819 145 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 Q3ZCU0 254 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 RNASE12Q5GAN4 147 aaKnown RBP7.62□□□□□ -1.19
ATXN3-201ENST00000340660 ATAD3CQ5T2N8 411 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 LINC01590Q5TEZ4 76 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 METTL21CQ5VZV1 264 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 OR4A47Q6IF82 309 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 RRM2BQ7LG56 351 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 ERI1Q8IV48 349 aaKnown RBP7.62□□□□□ -1.19
ATXN3-201ENST00000340660 ODF3L1Q8IXM7 274 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 OR6K6Q8NGW6 343 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 MARC2Q969Z3 335 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 CHST5Q9GZS9 411 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 ZNF586Q9NXT0 402 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 MRPL27Q9P0M9 148 aaKnown RBP7.62□□□□□ -1.19
ATXN3-201ENST00000340660 HAO1Q9UJM8 370 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 V9GYS6 101 aa7.62□□□□□ -1.19
ATXN3-201ENST00000340660 IGKV1-12A0A0C4DH73 117 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 FAM90A7PA6NKC0 464 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 FAM223BA6NKX1 122 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 RS1O15537 224 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 ZNF682O95780 498 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 IGKV1D-12P01611 117 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 SPART-AS1P0CW21 52 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 APELAP0DMC3 54 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 C4BPBP20851 252 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 CCL18P55774 89 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 LIPKQ5VXJ0 399 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 FUNDC1Q8IVP5 155 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 FAM223AQ8IWN6 122 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 BBS1Q8NFJ9 593 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 TSPYL1Q9H0U9 437 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 KAT8Q9H7Z6 458 aaKnown RBP7.61□□□□□ -1.19
ATXN3-201ENST00000340660 SLC2A9Q9NRM0 540 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 CLEC5AQ9NY25 188 aa7.61□□□□□ -1.19
ATXN3-201ENST00000340660 TRBV9A0A0B4J1U6 114 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 SMIM23A6NLE4 172 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 DYNC1I1O14576 645 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 DEGS1O15121 323 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 SLC22A1O15245 554 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 IDH3BO43837 385 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 SPI1P17947 270 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 GZMMP51124 257 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 PSG5Q15238 335 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 FAM106AQ4KMX7 169 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 SSX7Q7RTT5 188 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 SLC37A3Q8NCC5 494 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 CSNK1G2-AS1Q8NCQ2 148 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 OR10V1Q8NGI7 309 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 ARL11Q969Q4 196 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 SPDL1Q96EA4 605 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 INTS14Q96SY0 518 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 FAM118AQ9NWS6 357 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 TAS2R1Q9NYW7 299 aa7.6□□□□□ -1.19
ATXN3-201ENST00000340660 TRAV24A0A0B4J272 114 aa7.59□□□□□ -1.19
ATXN3-201ENST00000340660 MRPS14O60783 128 aaKnown RBP7.59□□□□□ -1.19
ATXN3-201ENST00000340660 RAP2BP61225 183 aa7.59□□□□□ -1.19
ATXN3-201ENST00000340660 PAX5Q02548 391 aa7.59□□□□□ -1.19
ATXN3-201ENST00000340660 TMEM69Q5SWH9 247 aa7.59□□□□□ -1.19
ATXN3-201ENST00000340660 LPCAT4Q643R3 524 aa7.59□□□□□ -1.19
ATXN3-201ENST00000340660 OR10A6Q8NH74 314 aa7.59□□□□□ -1.19
ATXN3-201ENST00000340660 TPD52L3Q96J77 140 aa7.59□□□□□ -1.19
ATXN3-201ENST00000340660 TMEM68Q96MH6 324 aa7.59□□□□□ -1.19
ATXN3-201ENST00000340660 NMNAT2Q9BZQ4 307 aa7.59□□□□□ -1.19
ATXN3-201ENST00000340660 TMEM14BQ9NUH8 114 aa7.59□□□□□ -1.19
ATXN3-201ENST00000340660 TMEM269A0A1B0GVZ9 245 aa7.58□□□□□ -1.2
ATXN3-201ENST00000340660 CYB5AP00167 134 aa7.58□□□□□ -1.2
ATXN3-201ENST00000340660 CTSDP07339 412 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-201ENST00000340660 LYNP07948 512 aa7.58□□□□□ -1.2
ATXN3-201ENST00000340660 ARL3P36405 182 aa7.58□□□□□ -1.2
ATXN3-201ENST00000340660 FUT6P51993 359 aa7.58□□□□□ -1.2
ATXN3-201ENST00000340660 PJVKQ0ZLH3 352 aa7.58□□□□□ -1.2
ATXN3-201ENST00000340660 CYBRD1Q53TN4 286 aa7.58□□□□□ -1.2
ATXN3-201ENST00000340660 PAN3Q58A45 887 aaKnown RBP7.58□□□□□ -1.2
ATXN3-201ENST00000340660 LAMTOR1Q6IAA8 161 aa7.58□□□□□ -1.2
ATXN3-201ENST00000340660 PRR18Q8N4B5 295 aa7.58□□□□□ -1.2
ATXN3-201ENST00000340660 EIF1ADQ8N9N8 165 aaKnown RBP7.58□□□□□ -1.2
ATXN3-201ENST00000340660 THEM6Q8WUY1 208 aa7.58□□□□□ -1.2
ATXN3-201ENST00000340660 RCC2Q9P258 522 aaKnown RBP7.58□□□□□ -1.2
ATXN3-201ENST00000340660 IGLV5-52A0A0A0MRZ9 124 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 TRBV5-7A0A0A0MS05 114 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 A0A1B0GTI1 187 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 ACOD1A6NK06 481 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 H0YJX3 145 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 IGHV3-23P01764 117 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 TTRP02766 147 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 EPHA2P29317 976 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 SLC1A6P48664 564 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 RIPK1Q13546 671 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 C15orf32Q32M92 178 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 FAM209BQ5JX69 171 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 C8orf82Q6P1X6 216 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-201ENST00000340660 Q6ZSA8 131 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 ZNF833PQ6ZTB9 187 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 SHFQ7M4L6 423 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 OR52L2PQ8NGH6 319 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 BORCS8Q96FH0 119 aa7.57□□□□□ -1.2
ATXN3-201ENST00000340660 NIPSNAP3BQ9BS92 247 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms