RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 ZNF418Q8TF45 676 aaPredicted RBP6.53□□□□□ -1.36
HIPK1-201ENST00000340480 NPAS1Q99742 590 aa6.53□□□□□ -1.36
HIPK1-201ENST00000340480 PNRC2Q9NPJ4 139 aaKnown RBP6.53□□□□□ -1.36
HIPK1-201ENST00000340480 ZNF586Q9NXT0 402 aa6.53□□□□□ -1.36
HIPK1-201ENST00000340480 PPP1R2P9O14990 202 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 NUPL2O15504 423 aaKnown RBP6.52□□□□□ -1.37
HIPK1-201ENST00000340480 GAMTQ14353 236 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 TMEM97Q5BJF2 176 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 TMEM42Q69YG0 159 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 ADAD2Q8NCV1 583 aaKnown RBP6.52□□□□□ -1.37
HIPK1-201ENST00000340480 KLHDC3Q9BQ90 382 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 ZDHHC8Q9ULC8 765 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 CNOT1A5YKK6 2376 aaKnown RBP6.52□□□□□ -1.37
HIPK1-201ENST00000340480 A0A1W2PR80 420 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 PQLC2LA1A4F0 135 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 SYNGR2O43760 224 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 GLI4P10075 376 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 LPAR6P43657 344 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 PLAC9Q5JTB6 97 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 ZNF66Q6ZN08 573 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 TMEM182Q6ZP80 229 aaPredicted RBP6.52□□□□□ -1.37
HIPK1-201ENST00000340480 MRPL24Q96A35 216 aaKnown RBP6.52□□□□□ -1.37
HIPK1-201ENST00000340480 C5orf66Q9H5L9 145 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 COL4A3Q01955 1670 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 IGKV1-9A0A0C4DH69 117 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 UBE2L6O14933 153 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 IGHG3P01860 377 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 CELA3AP09093 270 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 TMEM33P57088 247 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 PMP22Q01453 160 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 Q0VFX4 171 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 C19orf54Q5BKX5 351 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 CXorf67Q86X51 503 aaPredicted RBP6.52□□□□□ -1.37
HIPK1-201ENST00000340480 ZNF596Q8TC21 504 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 MESP1Q9BRJ9 268 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 ZDHHC11Q9H8X9 412 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 URGCP-MRPS24S4R325 110 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 A0A1W2PRD5 423 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 A0A1W2PRF3 423 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 A0A1W2PRM7 423 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 FCGR3BO75015 233 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 TMEM50BP56557 158 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 LOXL3P58215 753 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 ACSF3Q4G176 576 aaPredicted RBP6.52□□□□□ -1.37
HIPK1-201ENST00000340480 ZNF787Q6DD87 383 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 NKX6-2Q9C056 277 aaPredicted RBP6.52□□□□□ -1.37
HIPK1-201ENST00000340480 GLRXP35754 106 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 IFITM2Q01629 132 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 ASPHD2Q6ICH7 369 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 DPPA3Q6W0C5 159 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 PERPQ96FX8 193 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 SNX22Q96L94 193 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 ELOVL1Q9BW60 279 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 TUBA4BQ9H853 241 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 DLL3Q9NYJ7 618 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 WIPI2Q9Y4P8 454 aa6.52□□□□□ -1.37
HIPK1-201ENST00000340480 TEX50A0A1B0GTY4 177 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 MMP7P09237 267 aaPredicted RBP6.51□□□□□ -1.37
HIPK1-201ENST00000340480 LYZP61626 148 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 MRPS11P82912 194 aaKnown RBP6.51□□□□□ -1.37
HIPK1-201ENST00000340480 TMEM255AQ5JRV8 349 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 TGIF2LYQ8IUE0 185 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 TGIF2LXQ8IUE1 241 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 SIGLECL1Q8N7X8 197 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 PARP11Q9NR21 331 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 CCL28Q9NRJ3 127 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 UQCC1Q9NVA1 299 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 CACNG5Q9UF02 275 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 KIF26AQ9ULI4 1882 aaPredicted RBP6.51□□□□□ -1.37
HIPK1-201ENST00000340480 FAM106CPP0CH98 169 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 SULT1A1P50225 295 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 ATP5J2P56134 94 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 DCAF12L2Q5VW00 463 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 ZNF705AQ6ZN79 300 aaPredicted RBP6.51□□□□□ -1.37
HIPK1-201ENST00000340480 PAQR4Q8N4S7 273 aaPredicted RBP6.51□□□□□ -1.37
HIPK1-201ENST00000340480 KLF14Q8TD94 323 aaPredicted RBP6.51□□□□□ -1.37
HIPK1-201ENST00000340480 OR2D2Q9H210 308 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 PSG11Q9UQ72 335 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 ARL2-SNX15V9GYD0 113 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 IQCF6A8MYZ5 107 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 BTN1A1Q13410 526 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 DDB2Q92466 427 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 SNRNP200O75643 2136 aaKnown RBP6.51□□□□□ -1.37
HIPK1-201ENST00000340480 CXCL2P19875 107 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 CD80P33681 288 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 H2BFSP57053 126 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 PDCD1Q15116 288 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 DHRS7BQ6IAN0 325 aaPredicted RBP6.51□□□□□ -1.37
HIPK1-201ENST00000340480 DCAF16Q9NXF7 216 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 FZR1Q9UM11 496 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 MOB4Q9Y3A3 225 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 INSIG2Q9Y5U4 225 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 ZNF727A8MUV8 499 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 G3V3Q6 166 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 TMPRSS2O15393 492 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 NDUFA2O43678 99 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 DKK1O94907 266 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 GALR1P47211 349 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 DHRS11Q6UWP2 260 aa6.51□□□□□ -1.37
HIPK1-201ENST00000340480 LPAR2Q9HBW0 351 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms