RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 OR5H14A6NHG9 310 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 NDUFS8O00217 210 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 JTBO76095 146 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 FXYD3Q14802 87 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 CLEC9AQ6UXN8 241 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 FAM219AQ8IW50 185 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 NEUROG1Q92886 237 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 PDGFAP04085 211 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 PSG2P11465 335 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 SLC35E4Q6ICL7 350 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 DTD1Q8TEA8 209 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 PARP12Q9H0J9 701 aaKnown RBP10.87□□□□□ -0.67
LIN54-201ENST00000340417 RPL8P62917 257 aaKnown RBP10.87□□□□□ -0.67
LIN54-201ENST00000340417 IGSF11Q5DX21 431 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 MAPK1IP1LQ8NDC0 245 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 KIAA1324LA8MWY0 1029 aaPredicted RBP10.86□□□□□ -0.67
LIN54-201ENST00000340417 APOC3P02656 99 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 SSTR5P35346 364 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 CELF2-AS1Q8N7Q2 184 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 LRRC75AQ8NAA5 344 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 LURAP1Q96LR2 239 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 MRPL13Q9BYD1 178 aaKnown RBP10.86□□□□□ -0.67
LIN54-201ENST00000340417 WSB1Q9Y6I7 421 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 DPRXA6NFQ7 191 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 CEACAM18A8MTB9 384 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 KLF4O43474 513 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 TRGV3P03979 118 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 CD1AP06126 327 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 LIAT1Q6ZQX7 453 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 GGNBP1Q5YKI7 109 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 HCP5Q6MZN7 132 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 C8orf46Q8TAG6 207 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 EAF1Q96JC9 268 aaPredicted RBP10.86□□□□□ -0.67
LIN54-201ENST00000340417 METTL26Q96S19 204 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 C2orf16Q68DN1 1984 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 SLC25A4P12235 298 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 BPESC1Q9GZL8 116 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 PUS1Q9Y606 427 aaKnown RBP eCLIP10.86□□□□□ -0.67
LIN54-201ENST00000340417 SNRPGP15A8MWD9 76 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 GIPP09681 153 aaPredicted RBP10.86□□□□□ -0.67
LIN54-201ENST00000340417 METTL15P1P0C7V9 234 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 SPP1P10451 314 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 RCC1P18754 421 aaPredicted RBP10.86□□□□□ -0.67
LIN54-201ENST00000340417 PRB3Q04118 309 aaPredicted RBP10.86□□□□□ -0.67
LIN54-201ENST00000340417 C11orf44Q8N8P7 122 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 OR4A5Q8NH83 315 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 ATP5SQ99766 215 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 V9GYS6 101 aa10.86□□□□□ -0.67
LIN54-201ENST00000340417 OPCMLQ14982 345 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 SURF2Q15527 256 aaPredicted RBP10.85□□□□□ -0.67
LIN54-201ENST00000340417 HIST2H3PS2Q5TEC6 136 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 MBNL2Q5VZF2 373 aaKnown RBP10.85□□□□□ -0.67
LIN54-201ENST00000340417 EBLN2Q6P2I7 272 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 RNF141Q8WVD5 230 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 ZNF107Q9UII5 783 aaPredicted RBP10.85□□□□□ -0.67
LIN54-201ENST00000340417 TCRBV4S1A1TA0A5B7 111 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 DUX5Q96PT3 197 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 PLSCR3Q9NRY6 295 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 LINC00312Q9Y6C7 94 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 BDP1A6H8Y1 2624 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 TRBV5-5A0A0J9YX44 114 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 NPIPB7O75200 414 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 SLC25A5P05141 298 aaKnown RBP10.85□□□□□ -0.67
LIN54-201ENST00000340417 S100A11P31949 105 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 PPP1R1AQ13522 171 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 HOGA1Q86XE5 327 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 SLC2A9Q9NRM0 540 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 NPIPB11E5RHQ5 1161 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 HPXP02790 462 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 CNN1P51911 297 aaKnown RBP10.85□□□□□ -0.67
LIN54-201ENST00000340417 FFAR4Q5NUL3 377 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 EEF1AKMT3Q96AZ1 226 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 SLC25A33Q9BSK2 321 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 PRORYQ9H606 182 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 SIRT4Q9Y6E7 314 aaPredicted RBP10.85□□□□□ -0.67
LIN54-201ENST00000340417 J3KRW8 73 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 M0QZK8 103 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 NPY1RP25929 384 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 EFNB2P52799 333 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 EXOSC2Q13868 293 aaKnown RBP10.85□□□□□ -0.67
LIN54-201ENST00000340417 ZNF485Q8NCK3 441 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 PTX4Q96A99 478 aa10.85□□□□□ -0.67
LIN54-201ENST00000340417 RBM14Q96PK6 669 aaKnown RBP10.85□□□□□ -0.67
LIN54-201ENST00000340417 PLAUP00749 431 aa10.84□□□□□ -0.67
LIN54-201ENST00000340417 FGFBP3Q8TAT2 258 aa10.84□□□□□ -0.67
LIN54-201ENST00000340417 E7EQL1 145 aa10.84□□□□□ -0.67
LIN54-201ENST00000340417 GALR1P47211 349 aa10.84□□□□□ -0.67
LIN54-201ENST00000340417 ALKAL2Q6UX46 152 aa10.84□□□□□ -0.67
LIN54-201ENST00000340417 FANCMQ8IYD8 2048 aa10.84□□□□□ -0.67
LIN54-201ENST00000340417 ARTNQ5T4W7 220 aa10.84□□□□□ -0.67
LIN54-201ENST00000340417 ZNF426Q9BUY5 554 aa10.84□□□□□ -0.67
LIN54-201ENST00000340417 KIF26AQ9ULI4 1882 aaPredicted RBP10.84□□□□□ -0.67
LIN54-201ENST00000340417 SERTM2A0A1B0GWG4 89 aa10.84□□□□□ -0.67
LIN54-201ENST00000340417 CEACAM8P31997 349 aaPredicted RBP10.84□□□□□ -0.67
LIN54-201ENST00000340417 PRR27Q6MZM9 219 aa10.84□□□□□ -0.67
LIN54-201ENST00000340417 SLA2Q9H6Q3 261 aa10.84□□□□□ -0.67
LIN54-201ENST00000340417 GNG13Q9P2W3 67 aa10.84□□□□□ -0.67
LIN54-201ENST00000340417 C9orf170A2RU37 121 aa10.83□□□□□ -0.67
LIN54-201ENST00000340417 SYNGR2O43760 224 aa10.83□□□□□ -0.67
LIN54-201ENST00000340417 SOX15O60248 233 aa10.83□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms