RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 NUBP2Q9Y5Y2 271 aa12.61□□□□□ -0.39
H3F3C-201ENST00000340398 HTR2CP28335 458 aa12.6□□□□□ -0.39
H3F3C-201ENST00000340398 LY6G6FQ5SQ64 297 aa12.6□□□□□ -0.39
H3F3C-201ENST00000340398 ZNF660Q6AZW8 331 aaPredicted RBP12.6□□□□□ -0.39
H3F3C-201ENST00000340398 ACSM6Q6P461 480 aa12.6□□□□□ -0.39
H3F3C-201ENST00000340398 HAPLN4Q86UW8 402 aa12.6□□□□□ -0.39
H3F3C-201ENST00000340398 ABHD14BQ96IU4 210 aa12.6□□□□□ -0.39
H3F3C-201ENST00000340398 CLCC1Q96S66 551 aa12.6□□□□□ -0.39
H3F3C-201ENST00000340398 FAM103A1Q9BTL3 118 aaKnown RBP12.6□□□□□ -0.39
H3F3C-201ENST00000340398 KCNK15Q9H427 330 aa12.6□□□□□ -0.39
H3F3C-201ENST00000340398 FOXA2Q9Y261 457 aaPredicted RBP12.6□□□□□ -0.39
H3F3C-201ENST00000340398 ERGIC3Q9Y282 383 aa12.6□□□□□ -0.39
H3F3C-201ENST00000340398 RRHO14718 337 aa12.59□□□□□ -0.39
H3F3C-201ENST00000340398 RGS11O94810 467 aa12.59□□□□□ -0.39
H3F3C-201ENST00000340398 LINC00205P59089 165 aa12.59□□□□□ -0.39
H3F3C-201ENST00000340398 MED21Q13503 144 aa12.59□□□□□ -0.39
H3F3C-201ENST00000340398 HMGN3Q15651 99 aa12.59□□□□□ -0.39
H3F3C-201ENST00000340398 LAIR2Q6ISS4 152 aa12.59□□□□□ -0.39
H3F3C-201ENST00000340398 ABHD5Q8WTS1 349 aa12.59□□□□□ -0.39
H3F3C-201ENST00000340398 NEDD4LQ96PU5 975 aa12.59□□□□□ -0.39
H3F3C-201ENST00000340398 UQCC2Q9BRT2 126 aa12.59□□□□□ -0.39
H3F3C-201ENST00000340398 GSTP1P09211 210 aaKnown RBP12.58□□□□□ -0.4
H3F3C-201ENST00000340398 LGALS1P09382 135 aaKnown RBP12.58□□□□□ -0.4
H3F3C-201ENST00000340398 CRIP2P52943 208 aaPredicted RBP12.58□□□□□ -0.4
H3F3C-201ENST00000340398 PLGLAQ15195 96 aa12.58□□□□□ -0.4
H3F3C-201ENST00000340398 SRSF7Q16629 238 aaKnown RBP eCLIP12.58□□□□□ -0.4
H3F3C-201ENST00000340398 PPP1R27Q86WC6 154 aa12.58□□□□□ -0.4
H3F3C-201ENST00000340398 SETD6Q8TBK2 473 aa12.58□□□□□ -0.4
H3F3C-201ENST00000340398 NICN1Q9BSH3 213 aa12.58□□□□□ -0.4
H3F3C-201ENST00000340398 CST11Q9H112 138 aa12.58□□□□□ -0.4
H3F3C-201ENST00000340398 ABRACLQ9P1F3 81 aa12.58□□□□□ -0.4
H3F3C-201ENST00000340398 STEAP1Q9UHE8 339 aa12.58□□□□□ -0.4
H3F3C-201ENST00000340398 LRRC42Q9Y546 428 aa12.58□□□□□ -0.4
H3F3C-201ENST00000340398 EFCAB10A6NFE3 127 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 H0YJW9 148 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 HSPB1P04792 205 aaKnown RBP12.57□□□□□ -0.4
H3F3C-201ENST00000340398 LYL1P12980 280 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 TAS2R43P59537 309 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 ACTBL2Q562R1 376 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 TTC23Q5W5X9 447 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 UNQ5815/PRO19632Q6UWF5 114 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 DRAXINQ8NBI3 349 aaPredicted RBP12.57□□□□□ -0.4
H3F3C-201ENST00000340398 LFNGQ8NES3 379 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 OR6Q1Q8NGQ2 317 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 GHITMQ9H3K2 345 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 PIPOXQ9P0Z9 390 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 GHRLQ9UBU3 117 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 SLC23A1Q9UHI7 598 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 RNF150Q9ULK6 438 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 CSMD3Q7Z407 3707 aa12.57□□□□□ -0.4
H3F3C-201ENST00000340398 A0A0A6YYD4 124 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 H7C2Y5 167 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 RAB29O14966 203 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 PROP1O75360 226 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 CD1AP06126 327 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 GNAO1P09471 354 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 WNT4P56705 351 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 RPS27AP62979 156 aaKnown RBP12.56□□□□□ -0.4
H3F3C-201ENST00000340398 TMEM267Q0VDI3 215 aaPredicted RBP12.56□□□□□ -0.4
H3F3C-201ENST00000340398 ACSM3Q53FZ2 586 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 ZFAND6Q6FIF0 208 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 ZNF880Q6PDB4 577 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 CD200R1LQ6Q8B3 271 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 LRRTM1Q86UE6 522 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 Q8N1Y9 231 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 SVOPQ8N4V2 548 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 DHRSXQ8N5I4 330 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 NANOGP1Q8N7R0 232 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 NKAIN3Q8N8D7 197 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 RHOVQ96L33 236 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 OR4C12Q96R67 309 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 AGMATQ9BSE5 352 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 HDHD3Q9BSH5 251 aaPredicted RBP12.56□□□□□ -0.4
H3F3C-201ENST00000340398 ZMAT4Q9H898 229 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 CHMP1AQ9HD42 196 aaPredicted RBP12.56□□□□□ -0.4
H3F3C-201ENST00000340398 CNOT2Q9NZN8 540 aaKnown RBP12.56□□□□□ -0.4
H3F3C-201ENST00000340398 OR1A1Q9P1Q5 309 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 PSORS1C1Q9UIG5 152 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 DNAH1Q9P2D7 4330 aa12.56□□□□□ -0.4
H3F3C-201ENST00000340398 NAPSAO96009 420 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 OR8U9P0C7N5 309 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 TPPP2P59282 170 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 UNC119Q13432 240 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 PSG5Q15238 335 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 AKIRIN2Q53H80 203 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 FAM71F2Q6NXP2 309 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 AHSA2Q719I0 299 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 TCTEX1D1Q8N7M0 179 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 SETD9Q8NE22 299 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 BPIFB6Q8NFQ5 453 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 OR5AN1Q8NGI8 311 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 C11orf54Q9H0W9 315 aaPredicted RBP12.55□□□□□ -0.4
H3F3C-201ENST00000340398 METTL1Q9UBP6 276 aaKnown RBP12.55□□□□□ -0.4
H3F3C-201ENST00000340398 WASHC3Q9Y3C0 194 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 LYSTQ99698 3801 aa12.55□□□□□ -0.4
H3F3C-201ENST00000340398 TNCP24821 2201 aa12.54□□□□□ -0.4
H3F3C-201ENST00000340398 OR5H14A6NHG9 310 aa12.54□□□□□ -0.4
H3F3C-201ENST00000340398 MYL12BO14950 172 aa12.54□□□□□ -0.4
H3F3C-201ENST00000340398 SOCS1O15524 211 aa12.54□□□□□ -0.4
H3F3C-201ENST00000340398 UBBP0CG47 229 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms