RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 ABCA11PQ4W5N1 156 aa6.41□□□□□ -1.38
TMC1-202ENST00000340019 SMUG1Q53HV7 270 aa6.41□□□□□ -1.38
TMC1-202ENST00000340019 PRSS57Q6UWY2 283 aa6.41□□□□□ -1.38
TMC1-202ENST00000340019 SLC25A48Q6ZT89 311 aaKnown RBP6.41□□□□□ -1.38
TMC1-202ENST00000340019 ODF3L1Q8IXM7 274 aa6.41□□□□□ -1.38
TMC1-202ENST00000340019 DRAM1Q8N682 238 aa6.41□□□□□ -1.38
TMC1-202ENST00000340019 RTN4IP1Q8WWV3 396 aaPredicted RBP6.41□□□□□ -1.38
TMC1-202ENST00000340019 ABHD14BQ96IU4 210 aa6.41□□□□□ -1.38
TMC1-202ENST00000340019 ABHD14AQ9BUJ0 271 aa6.41□□□□□ -1.38
TMC1-202ENST00000340019 PSG11Q9UQ72 335 aa6.41□□□□□ -1.38
TMC1-202ENST00000340019 MAP1AP78559 2803 aaPredicted RBP6.41□□□□□ -1.38
TMC1-202ENST00000340019 HECTD1Q9ULT8 2610 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 IGHV2-70DA0A0C4DH43 119 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 M0R1W7 72 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 MPPED1O15442 326 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 PROP1O75360 226 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 FOXH1O75593 365 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 PGLYRP1O75594 196 aaPredicted RBP6.4□□□□□ -1.38
TMC1-202ENST00000340019 SFT2D2O95562 160 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 DUS4LO95620 317 aaKnown RBP6.4□□□□□ -1.38
TMC1-202ENST00000340019 CD34P28906 385 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 LCN2P80188 198 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 C1orf122Q6ZSJ8 110 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 CMTM1Q8IZ96 169 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 KIR3DL3Q8N743 410 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 ZBTB34Q8NCN2 500 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 MITD1Q8WV92 249 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 GALNT14Q96FL9 552 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 NAA60Q9H7X0 242 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 MMP26Q9NRE1 261 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 RNF150Q9ULK6 438 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 GAB2Q9UQC2 676 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 RBM7Q9Y580 266 aaKnown RBP6.4□□□□□ -1.38
TMC1-202ENST00000340019 SESN1Q9Y6P5 492 aa6.4□□□□□ -1.38
TMC1-202ENST00000340019 ENSAO43768 121 aaKnown RBP6.4□□□□□ -1.39
TMC1-202ENST00000340019 SLC22A5O76082 557 aa6.4□□□□□ -1.39
TMC1-202ENST00000340019 USF1P22415 310 aaPredicted RBP6.4□□□□□ -1.39
TMC1-202ENST00000340019 RAB7AP51149 207 aa6.4□□□□□ -1.39
TMC1-202ENST00000340019 RRAS2P62070 204 aaPredicted RBP6.4□□□□□ -1.39
TMC1-202ENST00000340019 Q5PR19 223 aa6.4□□□□□ -1.39
TMC1-202ENST00000340019 TBC1D26Q86UD7 250 aa6.4□□□□□ -1.39
TMC1-202ENST00000340019 SGPP2Q8IWX5 399 aa6.4□□□□□ -1.39
TMC1-202ENST00000340019 LINC00311Q8N616 119 aa6.4□□□□□ -1.39
TMC1-202ENST00000340019 CCDC71LQ8N9Z2 235 aa6.4□□□□□ -1.39
TMC1-202ENST00000340019 C1orf159Q96HA4 380 aa6.4□□□□□ -1.39
TMC1-202ENST00000340019 GPHA2Q96T91 129 aa6.4□□□□□ -1.39
TMC1-202ENST00000340019 TMEM133Q9H2Q1 129 aa6.4□□□□□ -1.39
TMC1-202ENST00000340019 SDHAF2Q9NX18 166 aa6.4□□□□□ -1.39
TMC1-202ENST00000340019 ONECUT1Q9UBC0 465 aa6.4□□□□□ -1.39
TMC1-202ENST00000340019 A0A1W2PPE3 182 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 HMX3A6NHT5 357 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 TNFSF12O43508 249 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 TRAPPC2P0DI81 140 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 TRAPPC2BP0DI82 140 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 VAMP1P23763 118 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 ARF6P62330 175 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 C1orf229Q6ZS94 237 aaPredicted RBP6.39□□□□□ -1.39
TMC1-202ENST00000340019 KCTD9Q7L273 389 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 ZNF251Q9BRH9 671 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 SUCNR1Q9BXA5 334 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 UNKLQ9H9P5 680 aaKnown RBP6.39□□□□□ -1.39
TMC1-202ENST00000340019 KCNS2Q9ULS6 477 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 KPTNQ9Y664 436 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 PRRC2AP48634 2157 aaKnown RBP6.39□□□□□ -1.39
TMC1-202ENST00000340019 hCG_1809904A0A1W2PP81 198 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 A0A1W2PPE2 198 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 A0A1W2PR64 198 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 A0A1W2PRV1 198 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 DBX1A6NMT0 343 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 J3QR06 171 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 GNG10P50151 68 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 DLX1P56177 255 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 THOC7Q6I9Y2 204 aaKnown RBP6.39□□□□□ -1.39
TMC1-202ENST00000340019 OR11H7Q8NGC8 314 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 TP53RKQ96S44 253 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 SIRPDQ9H106 197 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 METTL8Q9H825 291 aaKnown RBP6.39□□□□□ -1.39
TMC1-202ENST00000340019 ZNRD1Q9P1U0 126 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 CR1P17927 2039 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 WNK2Q9Y3S1 2297 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 SAA2-SAA4A0A096LPE2 208 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 IGHV2-26A0A0B4J1V2 119 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 TEX13DA0A0J9YY54 714 aaPredicted RBP6.39□□□□□ -1.39
TMC1-202ENST00000340019 C3orf85A0A1B0GTC6 90 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 RAB29O14966 203 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 IFNA2P01563 188 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 OR5AC1P0C628 307 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 SAA2P0DJI9 122 aaPredicted RBP6.39□□□□□ -1.39
TMC1-202ENST00000340019 SULT1A3P0DMM9 295 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 SULT1A4P0DMN0 295 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 MMP9P14780 707 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 PRTN3P24158 256 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 F2RP25116 425 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 GPR12P47775 334 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 TMEM187Q14656 261 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 FCN2Q15485 313 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 SLC9A3R2Q15599 337 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 ANKRD55Q3KP44 614 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 ABHD12Q8N2K0 398 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 C12orf45Q8N5I9 185 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms