RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 Q6ZT83 130 aa13.71□□□□□ -0.22
LITAF-201ENST00000339430 RAB40CQ96S21 281 aa13.71□□□□□ -0.22
LITAF-201ENST00000339430 RSG1Q9BU20 258 aa13.71□□□□□ -0.22
LITAF-201ENST00000339430 MBNL3Q9NUK0 354 aaKnown RBP13.71□□□□□ -0.22
LITAF-201ENST00000339430 UFSP2Q9NUQ7 469 aa13.71□□□□□ -0.22
LITAF-201ENST00000339430 PKD1L2Q7Z442 2459 aa13.7□□□□□ -0.22
LITAF-201ENST00000339430 TMEM8BA6NDV4 472 aa13.7□□□□□ -0.22
LITAF-201ENST00000339430 MBD3L4A6NDZ8 208 aaPredicted RBP13.7□□□□□ -0.22
LITAF-201ENST00000339430 MBD3L3A6NE82 208 aaPredicted RBP13.7□□□□□ -0.22
LITAF-201ENST00000339430 MBD3L5A6NJ08 208 aaPredicted RBP13.7□□□□□ -0.22
LITAF-201ENST00000339430 OR3A1P47881 315 aa13.7□□□□□ -0.22
LITAF-201ENST00000339430 TAS2R30P59541 319 aa13.7□□□□□ -0.22
LITAF-201ENST00000339430 AESQ08117 197 aa13.7□□□□□ -0.22
LITAF-201ENST00000339430 ARL16Q0P5N6 197 aa13.7□□□□□ -0.22
LITAF-201ENST00000339430 C1orf185Q5T7R7 199 aa13.7□□□□□ -0.22
LITAF-201ENST00000339430 PRAMEF6Q5VXH4 476 aa13.7□□□□□ -0.22
LITAF-201ENST00000339430 GFRALQ6UXV0 394 aa13.7□□□□□ -0.22
LITAF-201ENST00000339430 FAM24BQ8N5W8 94 aa13.7□□□□□ -0.22
LITAF-201ENST00000339430 KDF1Q8NAX2 398 aaPredicted RBP13.7□□□□□ -0.22
LITAF-201ENST00000339430 MBD3L2Q8NHZ7 208 aaPredicted RBP13.7□□□□□ -0.22
LITAF-201ENST00000339430 LIN7CQ9NUP9 197 aaKnown RBP13.7□□□□□ -0.22
LITAF-201ENST00000339430 PSENENQ9NZ42 101 aa13.7□□□□□ -0.22
LITAF-201ENST00000339430 WIPI2Q9Y4P8 454 aa13.7□□□□□ -0.22
LITAF-201ENST00000339430 INTS1Q8N201 2190 aaKnown RBP13.7□□□□□ -0.22
LITAF-201ENST00000339430 CHD3Q12873 2000 aaKnown RBP13.7□□□□□ -0.22
LITAF-201ENST00000339430 hCG_1809904A0A1W2PP81 198 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 A0A1W2PR64 198 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 A0A1W2PRV1 198 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 IFNA5P01569 189 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 SLC25A6P12236 298 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 HOXC12P31275 282 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 RAB5BP61020 215 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 ZNF808Q8N4W9 903 aaPredicted RBP13.69□□□□□ -0.22
LITAF-201ENST00000339430 LSM10Q969L4 123 aaKnown RBP13.69□□□□□ -0.22
LITAF-201ENST00000339430 A0A1B0GW64 132 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 PTAFRP25105 342 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 HOXA1P49639 335 aaPredicted RBP13.69□□□□□ -0.22
LITAF-201ENST00000339430 KLRB1Q12918 225 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 SHEQ5VZ18 495 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 OR52L2PQ8NGH6 319 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 MSL2Q9HCI7 577 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 WSB1Q9Y6I7 421 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 ACACBO00763 2458 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 USF3Q68DE3 2245 aa13.69□□□□□ -0.22
LITAF-201ENST00000339430 ATXN7O15265 892 aaPredicted RBP13.68□□□□□ -0.22
LITAF-201ENST00000339430 TNFSF13O75888 250 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 DFFBO76075 338 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 FABP6P51161 128 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 SNRPEP62304 92 aaKnown RBP13.68□□□□□ -0.22
LITAF-201ENST00000339430 C11orf53Q8IXP5 236 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 TPRX1Q8N7U7 411 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 EGLN1Q9GZT9 426 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 OR2D2Q9H210 308 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 KCNIP1Q9NZI2 227 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 KIAA1456Q9P272 454 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 ZGRF1Q86YA3 2104 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 DOCK11Q5JSL3 2073 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 C1orf196B1AJZ1 125 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 C12orf77C9JDV5 145 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 RAMP3O60896 148 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 FOLR2P14207 255 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 PAX6P26367 422 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 LY6DQ14210 128 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 ICAM4Q14773 271 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 SPANXN5Q5MJ07 72 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 Q6ZR03 302 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 WDR31Q8NA23 367 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 VSIRQ9H7M9 311 aa13.68□□□□□ -0.22
LITAF-201ENST00000339430 TMEM30CPA0ZSE6 113 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 TMEM210A6NLX4 147 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 PRRG2O14669 202 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 TIMM8AO60220 97 aaPredicted RBP13.67□□□□□ -0.22
LITAF-201ENST00000339430 MT-ND4LP03901 98 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 SRP19P09132 144 aaKnown RBP13.67□□□□□ -0.22
LITAF-201ENST00000339430 TLE4Q04727 773 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 HNF4GQ14541 408 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 RHEBQ15382 184 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 FIP1L1Q6UN15 594 aaKnown RBP13.67□□□□□ -0.22
LITAF-201ENST00000339430 HAPLN4Q86UW8 402 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 DOLPP1Q86YN1 238 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 FGFRL1Q8N441 504 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 OR8G5Q8NG78 346 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 EIF3GO75821 320 aaKnown RBP eCLIP13.67□□□□□ -0.22
LITAF-201ENST00000339430 SCAF4O95104 1147 aaKnown RBP13.67□□□□□ -0.22
LITAF-201ENST00000339430 WNT2P09544 360 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 CBR1P16152 277 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 IL2RGP31785 369 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 ZNF816Q0VGE8 651 aaPredicted RBP13.67□□□□□ -0.22
LITAF-201ENST00000339430 ALKBH2Q6NS38 261 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 CYB561D1Q8N8Q1 229 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 SCGB1C1Q8TD33 95 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 MRGPRDQ8TDS7 321 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 GALMQ96C23 342 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 STARD4Q96DR4 205 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 C5orf30Q96GV9 206 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 HES4Q9HCC6 221 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 METRNQ9UJH8 293 aa13.67□□□□□ -0.22
LITAF-201ENST00000339430 A0A1W2PPE3 182 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 BTBD17A6NE02 478 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 ZNF98A6NK75 572 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms