RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 METTL21EPA6NDL7 271 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 TRDCB7Z8K6 153 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 PROP1O75360 226 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 IGHG2P01859 326 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 CD3GP09693 182 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 TGFBR1P36897 503 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 CEACAM6P40199 344 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 RPL39P5Q59GN2 51 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 CENPVQ7Z7K6 275 aaPredicted RBP12.06□□□□□ -0.48
PRKN-201ENST00000338468 NDUFA11Q86Y39 141 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 LGALS14Q8TCE9 139 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 ABHD14BQ96IU4 210 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 NOL4LQ96MY1 436 aaPredicted RBP12.06□□□□□ -0.48
PRKN-201ENST00000338468 S1PR3Q99500 378 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 ATG5Q9H1Y0 275 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.06□□□□□ -0.48
PRKN-201ENST00000338468 ZNF230Q9UIE0 474 aaPredicted RBP12.06□□□□□ -0.48
PRKN-201ENST00000338468 NCBP2LA6PVI3 153 aaKnown RBP12.05□□□□□ -0.48
PRKN-201ENST00000338468 SERPINE3A8MV23 424 aa12.05□□□□□ -0.48
PRKN-201ENST00000338468 ZBTB25P24278 435 aa12.05□□□□□ -0.48
PRKN-201ENST00000338468 IGSF11Q5DX21 431 aa12.05□□□□□ -0.48
PRKN-201ENST00000338468 FAM71F2Q6NXP2 309 aa12.05□□□□□ -0.48
PRKN-201ENST00000338468 FAM71E2Q8N5Q1 922 aa12.05□□□□□ -0.48
PRKN-201ENST00000338468 OR5H6Q8NGV6 325 aa12.05□□□□□ -0.48
PRKN-201ENST00000338468 MAFIPQ8WZ33 124 aa12.05□□□□□ -0.48
PRKN-201ENST00000338468 TOLLIPQ9H0E2 274 aa12.05□□□□□ -0.48
PRKN-201ENST00000338468 ABCG5Q9H222 651 aa12.05□□□□□ -0.48
PRKN-201ENST00000338468 LIN7CQ9NUP9 197 aaKnown RBP12.05□□□□□ -0.48
PRKN-201ENST00000338468 IGKV1D-8A0A087WSZ0 117 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 RAB29O14966 203 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 FABP7O15540 132 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 HSPA12AO43301 675 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 GSTT2P0CG29 244 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 GSTT2BP0CG30 244 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 CT45A6P0DMU7 189 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 CT45A5P0DMU8 189 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 CT45A7P0DMV0 189 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 CNTFRP26992 372 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 GPR12P47775 334 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 CDNFQ49AH0 187 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 ZNF329Q86UD4 541 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 OR8H1Q8NGG4 311 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 OR4A4PQ8NGN8 299 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 SLC25A38Q96DW6 304 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 CABLES2Q9BTV7 478 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 RDH8Q9NYR8 311 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 PIPOXQ9P0Z9 390 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 LINC00527Q9UJ94 153 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 NBEAL2Q6ZNJ1 2754 aa12.04□□□□□ -0.48
PRKN-201ENST00000338468 OPN1MWP04001 364 aa12.03□□□□□ -0.48
PRKN-201ENST00000338468 OPN1MW2P0DN77 364 aa12.03□□□□□ -0.48
PRKN-201ENST00000338468 OPN1MW3P0DN78 364 aa12.03□□□□□ -0.48
PRKN-201ENST00000338468 GLDNQ6ZMI3 551 aaPredicted RBP12.03□□□□□ -0.48
PRKN-201ENST00000338468 Q6ZS49 121 aa12.03□□□□□ -0.48
PRKN-201ENST00000338468 SLC35E3Q7Z769 313 aa12.03□□□□□ -0.48
PRKN-201ENST00000338468 EDARADDQ8WWZ3 215 aa12.03□□□□□ -0.48
PRKN-201ENST00000338468 HSPB9Q9BQS6 159 aa12.03□□□□□ -0.48
PRKN-201ENST00000338468 RHBDL2Q9NX52 303 aa12.03□□□□□ -0.48
PRKN-201ENST00000338468 RNF150Q9ULK6 438 aa12.03□□□□□ -0.48
PRKN-201ENST00000338468 TRBV6-7A0A0A0MS04 114 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 A0A1W2PRX2 142 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 PSMB11A5LHX3 300 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 H0YJW9 148 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 AIREO43918 545 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 SCAND1P57086 179 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 LINC00205P59089 165 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 ACTBP60709 375 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 MRPS15P82914 257 aaKnown RBP12.02□□□□□ -0.49
PRKN-201ENST00000338468 ARFRP1Q13795 201 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 KIR2DS1Q14954 304 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 SRSF7Q16629 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
PRKN-201ENST00000338468 ZNF260Q3ZCT1 412 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 IDNKQ5T6J7 187 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 HACD4Q5VWC8 232 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 FAM131AQ6UXB0 335 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 STPG2Q8N412 459 aa12.02□□□□□ -0.49
PRKN-201ENST00000338468 TCRBV4S1A1TA0A5B7 111 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 TMEM235A6NFC5 223 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 BET1O15155 118 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 SSX5O60225 188 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 DIRAS3O95661 229 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 SMIM18P0DKX4 95 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 DTYMKP23919 212 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 RPS19P39019 145 aaKnown RBP12.01□□□□□ -0.49
PRKN-201ENST00000338468 SERPINB10P48595 397 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 ARL6IP1Q15041 203 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 MMDQ15546 238 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 TIMM50Q3ZCQ8 353 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 NPBQ8NG41 125 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 OR4X2Q8NGF9 303 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 OR5AN1Q8NGI8 311 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 CHPT1Q8WUD6 406 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 NUDCD2Q8WVJ2 157 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 R3HDM4Q96D70 268 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 C5orf30Q96GV9 206 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 RASL11BQ9BPW5 248 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 GHITMQ9H3K2 345 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 VCX3AQ9NNX9 186 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 ZNF107Q9UII5 783 aaPredicted RBP12.01□□□□□ -0.49
PRKN-201ENST00000338468 TSSC4Q9Y5U2 329 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms