RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 OR10Z1Q8NGY1 313 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 OR2V2Q96R30 315 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 GINS3Q9BRX5 216 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 C11orf1Q9H5F2 150 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 PLEKHF2Q9H8W4 249 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 PARP11Q9NR21 331 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 RNF115Q9Y4L5 304 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 MAP1AP78559 2803 aaPredicted RBP7.41□□□□□ -1.22
SNCA-201ENST00000336904 CLDN1O95832 211 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 RPL35P42766 123 aaKnown RBP7.41□□□□□ -1.22
SNCA-201ENST00000336904 AWAT1Q58HT5 328 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 UQCC3Q6UW78 93 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 SSX7Q7RTT5 188 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 HAPLN4Q86UW8 402 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 GALMQ96C23 342 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 SAT2Q96F10 170 aaPredicted RBP7.41□□□□□ -1.22
SNCA-201ENST00000336904 C14orf79Q96F83 325 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 UBE2L5PA0A1B0GUS4 154 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 LINC00473A8K010 186 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 SOX15O60248 233 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 CYB5R3P00387 301 aaPredicted RBP7.41□□□□□ -1.22
SNCA-201ENST00000336904 COX5AP20674 150 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 ID3Q02535 119 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 PRB3Q04118 309 aaPredicted RBP7.41□□□□□ -1.22
SNCA-201ENST00000336904 FOXC1Q12948 553 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 ZNF146Q15072 292 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 ZNF718Q3SXZ3 478 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 RPL39P5Q59GN2 51 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 GPR157Q5UAW9 335 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 ZNF880Q6PDB4 577 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 FAM185AQ8N0U4 392 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 RBMXL3Q8N7X1 1067 aaKnown RBP7.41□□□□□ -1.22
SNCA-201ENST00000336904 RXFP4Q8TDU9 374 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 SPIN2AQ99865 258 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 SPIN2BQ9BPZ2 258 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 PSENENQ9NZ42 101 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 KCNIP1Q9NZI2 227 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 A0A1W2PPE2 198 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 TMEM30CPA0ZSE6 113 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 ZNF891A8MT65 544 aaPredicted RBP7.4□□□□□ -1.22
SNCA-201ENST00000336904 UMAD1C9J7I0 102 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 FAM157AC9JC47 383 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 CD5P06127 495 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 CTXN2P0C2S0 81 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 BRWD1-AS2P59051 145 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 Q6ZS49 121 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 SPAG16Q8N0X2 631 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 ITLN1Q8WWA0 313 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 NINJ1Q92982 152 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 CABLES2Q9BTV7 478 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 CXXC4Q9H2H0 198 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 MLXQ9UH92 298 aa7.4□□□□□ -1.22
SNCA-201ENST00000336904 MED13LQ71F56 2210 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 hCG_1809904A0A1W2PP81 198 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 A0A1W2PR64 198 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 A0A1W2PRV1 198 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 ZFP92A6NM28 416 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 ZNF727A8MUV8 499 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.4□□□□□ -1.23
SNCA-201ENST00000336904 SNAPINO95295 136 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 CGAP01215 116 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 S100GP29377 79 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 DVL1P1P54792 670 aaPredicted RBP7.4□□□□□ -1.23
SNCA-201ENST00000336904 RND3P61587 244 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 SRPXP78539 464 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 IQCF2Q8IXL9 164 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 LILRB2Q8N423 598 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 ABHD17AQ96GS6 310 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 SEC11CQ9BY50 192 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 PLSCR4Q9NRQ2 329 aa7.4□□□□□ -1.23
SNCA-201ENST00000336904 SPTAN1Q13813 2472 aaKnown RBP7.4□□□□□ -1.23
SNCA-201ENST00000336904 HCFC1P51610 2035 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 TNCP24821 2201 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 IGKV1D-17A0A075B6S4 117 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.39□□□□□ -1.23
SNCA-201ENST00000336904 A0A1W2PPH5 198 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 K7N7A8 449 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 SYNGR2O43760 224 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 ZG16O60844 167 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 SEC11BP0C7V7 166 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 CD82P27701 267 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 CCL8P80075 99 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 FIP1L1Q6UN15 594 aaKnown RBP7.39□□□□□ -1.23
SNCA-201ENST00000336904 IGFL2Q6UWQ7 119 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 WFDC8Q8IUA0 241 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 SNIP1Q8TAD8 396 aaKnown RBP7.39□□□□□ -1.23
SNCA-201ENST00000336904 RIMS4Q9H426 269 aaPredicted RBP7.39□□□□□ -1.23
SNCA-201ENST00000336904 GNG12Q9UBI6 72 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 GLS2Q9UI32 602 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 SLC25A15Q9Y619 301 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 WSB1Q9Y6I7 421 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 URGCP-MRPS24S4R325 110 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 SPTBN1Q01082 2364 aaKnown RBP7.39□□□□□ -1.23
SNCA-201ENST00000336904 SLC31A2O15432 143 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 PITX3O75364 302 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 CRYBA1P05813 215 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 MYOD1P15172 320 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 PRDX2P32119 198 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 HMGN3Q15651 99 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 HFEQ30201 348 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms