RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 NAV3Q8IVL0 2385 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 HSD17B6O14756 317 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 TUSC2O75896 110 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 AADACP22760 399 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 GPR12P47775 334 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 REG1BP48304 166 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 RNASE10Q5GAN6 216 aaKnown RBP11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 RBMS3Q6XE24 437 aaKnown RBP11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 Q6YL49 198 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 ODF3L1Q8IXM7 274 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 GDPD1Q8N9F7 314 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF418Q8TF45 676 aaPredicted RBP11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 S100ZQ8WXG8 99 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 ST6GALNAC6Q969X2 333 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 AGMATQ9BSE5 352 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF2Q9BSG1 426 aaPredicted RBP11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 PRDM13Q9H4Q3 707 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 TAS2R8Q9NYW2 309 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 PIPOXQ9P0Z9 390 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF107Q9UII5 783 aaPredicted RBP11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 OR2W1Q9Y3N9 320 aa11.38□□□□□ -0.59
APOBEC3B-202ENST00000335760 SAA2-SAA4A0A096LPE2 208 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 ANKRD20A5PA0PJZ0 165 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 OOSP1A8MZH6 123 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 RAB29O14966 203 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 GAPDHP04406 335 aaKnown RBP11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 IFNA6P05013 189 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 SAA2P0DJI9 122 aaPredicted RBP11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 TBPP20226 339 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 LUMP51884 338 aaPredicted RBP11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF137PP52743 207 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 TSPAN5P62079 268 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 BAMBIQ13145 260 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 VAX1Q5SQQ9 334 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 STEAP1BQ6NZ63 245 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 DHRS11Q6UWP2 260 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 LDLRAD3Q86YD5 345 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 GIMAP1Q8WWP7 306 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 TRIM63Q969Q1 353 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 SDHCQ99643 169 aaPredicted RBP11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 TINAGL1Q9GZM7 467 aaPredicted RBP11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 OR2D2Q9H210 308 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 GHITMQ9H3K2 345 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF221Q9UK13 617 aa11.37□□□□□ -0.59
APOBEC3B-202ENST00000335760 MTORP42345 2549 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 IGKV1D-13A0A0B4J2D9 117 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 RAB3DO95716 219 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 PPYP01298 95 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 CD74P04233 296 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 IGKV1-13P0DP09 117 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 FXYD4P59646 89 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 HERV-K104P61576 105 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF816Q0VGE8 651 aaPredicted RBP11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 BAK1Q16611 211 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 LRRC75BQ2VPJ9 315 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 RPL39P5Q59GN2 51 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 CCDC144NLQ6NUI1 221 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF833PQ6ZTB9 187 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 TGIF2LXQ8IUE1 241 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 OR6F1Q8NGZ6 308 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 FAM216AQ8WUB2 273 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 RTN4IP1Q8WWV3 396 aaPredicted RBP11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 S1PR3Q99500 378 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 SSX3Q99909 188 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 MXRA5Q9NR99 2828 aa11.36□□□□□ -0.59
APOBEC3B-202ENST00000335760 A0A1W2PPI3 338 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 HOXA3O43365 443 aaPredicted RBP11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 CUBNO60494 3623 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 IGHV4-59P01825 116 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 AKAIN1P0CW23 69 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 INPP1P49441 399 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 RAB13P51153 203 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 ARHGDIBP52566 201 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF846Q147U1 533 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 MEF2DQ14814 521 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 TRIQKQ629K1 86 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF660Q6AZW8 331 aaPredicted RBP11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 FAM71F2Q6NXP2 309 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 MOB3BQ86TA1 216 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 OR8H3Q8N146 312 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 TOMM5Q8N4H5 51 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 OR4D10Q8NGI6 311 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 SECTM1Q8WVN6 248 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF251Q9BRH9 671 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 ABCB10Q9NRK6 738 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 TNFRSF19Q9NS68 423 aa11.35□□□□□ -0.59
APOBEC3B-202ENST00000335760 IGHV1-3A0A0C4DH29 117 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 VGLL3A8MV65 326 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 H3BUX3 64 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 TIMM23O14925 209 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 TXNL1O43396 289 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 TCF21O43680 179 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 IFNA2P01563 188 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 BRS3P32247 399 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 IER3P46695 156 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 AP3S2P59780 193 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 KLF9Q13886 244 aaPredicted RBP11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 AANATQ16613 207 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF57Q68EA5 555 aaPredicted RBP11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 FAAP20Q6NZ36 180 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms