RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 MT-ND4LP03901 98 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 BMI1P35226 326 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 ACOT6Q3I5F7 207 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-201ENST00000335508 TMUB2Q71RG4 321 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 SSX9Q7RTT3 188 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-201ENST00000335508 CHAC2Q8WUX2 184 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 R3HDM4Q96D70 268 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 H0Y980 276 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 COX7A1P24310 79 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 RAB32Q13637 225 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 TIGITQ495A1 244 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 ZFP82Q8N141 532 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 OSR1Q8TAX0 266 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-201ENST00000335508 CMTM2Q8TAZ6 248 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 SLX1AQ9BQ83 275 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 KLHDC3Q9BQ90 382 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 ABHD14AQ9BUJ0 271 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 MAGT1Q9H0U3 335 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 PROK2Q9HC23 129 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 PQLC2LA1A4F0 135 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 ZFP92A6NM28 416 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 PPP1R2P9O14990 202 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 BCL3P20749 454 aa5.85□□□□□ -1.47
SF3B1-201ENST00000335508 ACTR3CQ9C0K3 210 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-201ENST00000335508 F2RL2O00254 374 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 ZG16O60844 167 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 ADAP1O75689 374 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 UCP1P25874 307 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 AESQ08117 197 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 FHL1Q13642 323 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 C3orf36Q3SXR2 165 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 THNSL2Q86YJ6 484 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 BPIFCQ8NFQ6 507 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 SFT2D1Q8WV19 159 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 MARC2Q969Z3 335 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 TXNDC17Q9BRA2 123 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 FZR1Q9UM11 496 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 KBTBD11O94819 623 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 ADRA2AP08913 450 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 RCC1P18754 421 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-201ENST00000335508 PSMB3P49720 205 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 PDLIM4P50479 330 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 UNC119Q13432 240 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 ZNF146Q15072 292 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 ST3GAL2Q16842 350 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 ZNF488Q96MN9 340 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 RSPO3Q9BXY4 272 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-201ENST00000335508 MMP24Q9Y5R2 645 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 SETXQ7Z333 2677 aaKnown RBP5.84□□□□□ -1.47
SF3B1-201ENST00000335508 CST7O76096 145 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 C17orf107Q6ZR85 190 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 DTD1Q8TEA8 209 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 RNF2Q99496 336 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 DPM3Q9P2X0 92 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 PRR32B1ATL7 298 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 H3BP45 60 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 CFPP27918 469 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 PPP1CCP36873 323 aaKnown RBP5.84□□□□□ -1.47
SF3B1-201ENST00000335508 SULT1A1P50225 295 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 MMDQ15546 238 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 C4orf17Q53FE4 359 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 OR5B3Q8NH48 314 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 TNFRSF14Q92956 283 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 ZNF319Q9P2F9 582 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 LINC00312Q9Y6C7 94 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 PLXNA4Q9HCM2 1894 aa5.84□□□□□ -1.47
SF3B1-201ENST00000335508 SMLR1H3BR10 107 aa5.84□□□□□ -1.48
SF3B1-201ENST00000335508 AGPAT2O15120 278 aa5.84□□□□□ -1.48
SF3B1-201ENST00000335508 FOXG1P55316 489 aaPredicted RBP5.84□□□□□ -1.48
SF3B1-201ENST00000335508 SPCS3P61009 180 aa5.84□□□□□ -1.48
SF3B1-201ENST00000335508 NKX6-1P78426 367 aaPredicted RBP5.84□□□□□ -1.48
SF3B1-201ENST00000335508 BSPH1Q075Z2 132 aa5.84□□□□□ -1.48
SF3B1-201ENST00000335508 ZNF345Q14585 488 aa5.84□□□□□ -1.48
SF3B1-201ENST00000335508 KCNRGQ8N5I3 272 aa5.84□□□□□ -1.48
SF3B1-201ENST00000335508 TMEM147Q9BVK8 224 aa5.84□□□□□ -1.48
SF3B1-201ENST00000335508 HRH4Q9H3N8 390 aa5.84□□□□□ -1.48
SF3B1-201ENST00000335508 BOLA1Q9Y3E2 137 aa5.84□□□□□ -1.48
SF3B1-201ENST00000335508 COL4A4P53420 1690 aaPredicted RBP5.84□□□□□ -1.48
SF3B1-201ENST00000335508 ATXN7O15265 892 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-201ENST00000335508 HLA-GP17693 338 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 ZNF561Q8N587 486 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 OR51I2Q9H344 312 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 U3KQ87 197 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 C12orf77C9JDV5 145 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 RPL27AP46776 148 aaKnown RBP5.83□□□□□ -1.48
SF3B1-201ENST00000335508 P2RY1P47900 373 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 SERF2P84101 59 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 CLLU1Q5K131 121 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 OR10A7Q8NGE5 316 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 SDSLQ96GA7 329 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 NMES1Q9C002 83 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 LEUTXA8MZ59 168 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 ACAA1P09110 424 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-201ENST00000335508 SEC11BP0C7V7 166 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 RND3P61587 244 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 FRMPD3Q5JV73 1810 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 NUP210Q8TEM1 1887 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-201ENST00000335508 LRRK1Q38SD2 2015 aa5.83□□□□□ -1.48
SF3B1-201ENST00000335508 PPIAL4CA0A0B4J2A2 164 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms