RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ZNF92Q03936 586 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 PHYHD1Q5SRE7 291 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 MYPOPQ86VE0 399 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-201ENST00000334136 C1orf162Q8NEQ5 155 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-201ENST00000334136 MBD3L2Q8NHZ7 208 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-201ENST00000334136 ZNF524Q96C55 264 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 MTCH1Q9NZJ7 389 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 FUT9Q9Y231 359 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 WISP1O95388 367 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 HIST1H3AP68431 136 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 BCL2L2Q92843 193 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-201ENST00000334136 CCL28Q9NRJ3 127 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 CLDN14O95500 239 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 IL18BPO95998 194 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 PRDX4Q13162 271 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 FAM78BQ5VT40 261 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 BTNL8Q6UX41 500 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 EIF4E3Q8N5X7 224 aaKnown RBP10.1□□□□□ -0.79
HDAC6-201ENST00000334136 OR10A7Q8NGE5 316 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 WNT5BQ9H1J7 359 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 CXorf65A6NEN9 183 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 OPN1MWP04001 364 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 OPN1MW2P0DN77 364 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 OPN1MW3P0DN78 364 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 RFESDQ8TAC1 157 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 STARD4Q96DR4 205 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 GGACTQ9BVM4 153 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 LIN7CQ9NUP9 197 aaKnown RBP10.1□□□□□ -0.79
HDAC6-201ENST00000334136 ZNF586Q9NXT0 402 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 PQLC2LA1A4F0 135 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 GATCO43716 136 aaKnown RBP10.1□□□□□ -0.79
HDAC6-201ENST00000334136 DEDDO75618 318 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 ACAA1P09110 424 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-201ENST00000334136 PMCHP20382 165 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 VDAC1P21796 283 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 TNFAIP6P98066 277 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-201ENST00000334136 SLC38A11Q08AI6 406 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 FFAR4Q5NUL3 377 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 TECTBQ96PL2 329 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 RAB1BQ9H0U4 201 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 MS4A5Q9H3V2 200 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 PLSCR4Q9NRQ2 329 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 CISD1Q9NZ45 108 aaKnown RBP10.1□□□□□ -0.79
HDAC6-201ENST00000334136 RNF115Q9Y4L5 304 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 USF3Q68DE3 2245 aa10.1□□□□□ -0.79
HDAC6-201ENST00000334136 A0A0G2JNJ9 132 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 A0A1B0GV90 55 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 UNC119Q13432 240 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 SOX7Q9BT81 388 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 SLC2A8Q9NY64 477 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 Q9UFV3 132 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 MPC1Q9Y5U8 109 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 ZFYVE26Q68DK2 2539 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 TGIF2-C20orf24A0A0A6YYL0 155 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 DHRS7CA6NNS2 312 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 PTBP3O95758 552 aaKnown RBP10.09□□□□□ -0.79
HDAC6-201ENST00000334136 GAPDHP04406 335 aaKnown RBP10.09□□□□□ -0.79
HDAC6-201ENST00000334136 ZNF25P17030 456 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-201ENST00000334136 GABRA6Q16445 453 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 CXorf66Q5JRM2 361 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-201ENST00000334136 LINC00469Q8N7U9 141 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 RNF138Q8WVD3 245 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 PINX1Q96BK5 328 aaKnown RBP10.09□□□□□ -0.79
HDAC6-201ENST00000334136 CTDSP1Q9GZU7 261 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 NKX6-3A6NJ46 265 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 OR7C2O60412 319 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 COX5BP10606 129 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 FOXG1P55316 489 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-201ENST00000334136 Q3ZCU0 254 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 WDR25Q64LD2 544 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-201ENST00000334136 C1orf174Q8IYL3 243 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 RAB40CQ96S21 281 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 RSG1Q9BU20 258 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 VAMP8Q9BV40 100 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 ZNF665Q9H7R5 613 aa10.09□□□□□ -0.79
HDAC6-201ENST00000334136 CLN5O75503 358 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 APOA2P02652 100 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 PGA5P0DJD9 388 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 ACOT6Q3I5F7 207 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-201ENST00000334136 NRN1LQ496H8 165 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 TMEM252Q8N6L7 170 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 OR2T10Q8NGZ9 312 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 CACFD1Q9UGQ2 172 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 CARHSP1Q9Y2V2 147 aaKnown RBP10.08□□□□□ -0.8
HDAC6-201ENST00000334136 KMT2EQ8IZD2 1858 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 OR52M1Q8NGK5 317 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 TMEM171Q8WVE6 324 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 DAZAP1Q96EP5 407 aaKnown RBP10.08□□□□□ -0.8
HDAC6-201ENST00000334136 ZNF331Q9NQX6 463 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-201ENST00000334136 ELOA3CA0A087WX78 387 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-201ENST00000334136 PKIAP61925 76 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 RPRMLQ8N4K4 120 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 ABHD5Q8WTS1 349 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 H1FXQ92522 213 aaKnown RBP10.08□□□□□ -0.8
HDAC6-201ENST00000334136 CCL17Q92583 94 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 G6PC2Q9NQR9 355 aa10.08□□□□□ -0.8
HDAC6-201ENST00000334136 H0YIZ8 118 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 RND3P61587 244 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 PNRC1Q12796 327 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-201ENST00000334136 PRORYQ9H606 182 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms