RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 FGFRL1Q8N441 504 aa12.96□□□□□ -0.33
BRCC3-201ENST00000330045 CA5BP1Q8WTZ4 195 aa12.96□□□□□ -0.33
BRCC3-201ENST00000330045 OR4C12Q96R67 309 aa12.96□□□□□ -0.33
BRCC3-201ENST00000330045 P2RX4Q99571 388 aa12.96□□□□□ -0.33
BRCC3-201ENST00000330045 MED12LQ86YW9 2145 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 MGAQ8IWI9 3026 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 CDIPTO14735 213 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 SH2D1BO14796 132 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 HIST1H2BKO60814 126 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 IGHV2-70P01814 119 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 TRGC2P03986 189 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 HIST1H2BJP06899 126 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 HIST1H2BOP23527 126 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 HIST1H2BBP33778 126 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 HIST1H2BDP58876 126 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 HIST1H2BCP62807 126 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 ZNF146Q15072 292 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 HIST2H2BEQ16778 126 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 TMEM41BQ5BJD5 291 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.96□□□□□ -0.34
BRCC3-201ENST00000330045 HIST1H2BHQ93079 126 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 PINX1Q96BK5 328 aaKnown RBP12.96□□□□□ -0.34
BRCC3-201ENST00000330045 HIST1H2BNQ99877 126 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 HIST1H2BMQ99879 126 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 PARD6GQ9BYG4 376 aaPredicted RBP12.96□□□□□ -0.34
BRCC3-201ENST00000330045 OR2J1Q9GZK6 312 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 TMEM242Q9NWH2 141 aa12.96□□□□□ -0.34
BRCC3-201ENST00000330045 TRAV20A0A0B4J274 112 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 CYB5R3P00387 301 aaPredicted RBP12.95□□□□□ -0.34
BRCC3-201ENST00000330045 PGA5P0DJD9 388 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 S100A2P29034 98 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 FAM180AQ6UWF9 173 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 MRGPRGQ86SM5 289 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 MYPOPQ86VE0 399 aaPredicted RBP12.95□□□□□ -0.34
BRCC3-201ENST00000330045 OR13D1Q8NGV5 346 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 TAF15Q92804 592 aaKnown RBP eCLIP12.95□□□□□ -0.34
BRCC3-201ENST00000330045 DEFB127Q9H1M4 99 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 GAR1Q9NY12 217 aaKnown RBP12.95□□□□□ -0.34
BRCC3-201ENST00000330045 VAX2Q9UIW0 290 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 PTPRZ1P23471 2315 aaPredicted RBP12.95□□□□□ -0.34
BRCC3-201ENST00000330045 RNF212BA8MTL3 300 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 FAM90A26D6RGX4 464 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 CLDN34H7C241 214 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 PPP1CBP62140 327 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 SPNS3Q6ZMD2 512 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 EDARADDQ8WWZ3 215 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 SDF2L1Q9HCN8 221 aa12.95□□□□□ -0.34
BRCC3-201ENST00000330045 IGHV3-64DA0A0J9YX35 117 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 MAP1LC3B2A6NCE7 125 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 CEBPZOSA8MTT3 80 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 J3QW42 95 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 SMPD2O60906 423 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 CELA3BP08861 270 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 ELLP55199 621 aaPredicted RBP12.94□□□□□ -0.34
BRCC3-201ENST00000330045 SLC38A11Q08AI6 406 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 MRPL49Q13405 166 aaKnown RBP12.94□□□□□ -0.34
BRCC3-201ENST00000330045 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.94□□□□□ -0.34
BRCC3-201ENST00000330045 C1orf87Q8N0U7 546 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 MDS2Q8NDY4 140 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 WDYHV1Q96HA8 205 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 FAM210BQ96KR6 192 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 MAP1LC3BQ9GZQ8 125 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 UBE2L5PA0A1B0GUS4 154 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 IFNA1P01562 189 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 RND2P52198 227 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 ERVS71-1P61550 626 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 OR8G2PQ6IF36 304 aa12.94□□□□□ -0.34
BRCC3-201ENST00000330045 CLDN1O95832 211 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 TNFRSF9Q07011 255 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 PYY3Q5JQD4 70 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 RBKSQ9H477 322 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 CDH20Q9HBT6 801 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 SLC39A9Q9NUM3 307 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 KCNIP1Q9NZI2 227 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 SEC14L6B5MCN3 397 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 ZNF737O75373 536 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 GRPP07492 148 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 NKX6-1P78426 367 aaPredicted RBP12.93□□□□□ -0.34
BRCC3-201ENST00000330045 ALKBH6Q3KRA9 238 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 TMEM14EPQ6UXP3 125 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 ZNF645Q8N7E2 425 aa12.93□□□□□ -0.34
BRCC3-201ENST00000330045 FAM186AA6NE01 2351 aa12.92□□□□□ -0.34
BRCC3-201ENST00000330045 HAND1O96004 215 aa12.92□□□□□ -0.34
BRCC3-201ENST00000330045 IDH3GP51553 393 aaPredicted RBP12.92□□□□□ -0.34
BRCC3-201ENST00000330045 FAM209BQ5JX69 171 aa12.92□□□□□ -0.34
BRCC3-201ENST00000330045 BEND4Q6ZU67 534 aa12.92□□□□□ -0.34
BRCC3-201ENST00000330045 LHX4Q969G2 390 aa12.92□□□□□ -0.34
BRCC3-201ENST00000330045 GALMQ96C23 342 aa12.92□□□□□ -0.34
BRCC3-201ENST00000330045 DMXL2Q8TDJ6 3036 aa12.92□□□□□ -0.34
BRCC3-201ENST00000330045 TRGV5A0A0B4J1U4 118 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 PSPNO60542 156 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 RAMP3O60896 148 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 RAC2P15153 192 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 CD46P15529 392 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 WT1P19544 449 aaPredicted RBP12.91□□□□□ -0.34
BRCC3-201ENST00000330045 CEBPDP49716 269 aaPredicted RBP12.91□□□□□ -0.34
BRCC3-201ENST00000330045 PMS2P11Q13670 270 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 RPP25LQ8N5L8 163 aaKnown RBP12.91□□□□□ -0.34
BRCC3-201ENST00000330045 ZBTB34Q8NCN2 500 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 OR1L1Q8NH94 360 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms