RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 MMP9P14780 707 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 DVL1P1P54792 670 aaPredicted RBP12.46□□□□□ -0.42
PRPF3-201ENST00000324862 LOXL1Q08397 574 aaPredicted RBP12.46□□□□□ -0.42
PRPF3-201ENST00000324862 CBX3Q13185 183 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 TMEM249Q2WGJ8 235 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 SP6Q3SY56 376 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 LDLRAD2Q5SZI1 272 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 ZDHHC22Q8N966 263 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 MINDY2Q8NBR6 621 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 OR52M1Q8NGK5 317 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 TBX15Q96SF7 602 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 HIF1ANQ9NWT6 349 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 SDHAF2Q9NX18 166 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 INSIG2Q9Y5U4 225 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 ALG5Q9Y673 324 aa12.46□□□□□ -0.42
PRPF3-201ENST00000324862 TLN2Q9Y4G6 2542 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 CR1P17927 2039 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 IGHV3OR16-10A0A075B7F0 116 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 A0A0A6YYJ9 748 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 A0A1W2PPH5 198 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 SUPT4H1P63272 117 aaKnown RBP12.45□□□□□ -0.42
PRPF3-201ENST00000324862 Q3ZCU0 254 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 C4orf46Q504U0 113 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 SAA2-SAA4A0A096LPE2 208 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 RNASEK-C17orf49H0YIS7 233 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 CTSDP07339 412 aaPredicted RBP12.45□□□□□ -0.42
PRPF3-201ENST00000324862 OR4E1P0C645 316 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 SAA2P0DJI9 122 aaPredicted RBP12.45□□□□□ -0.42
PRPF3-201ENST00000324862 VAMP1P23763 118 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 REG1BP48304 166 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 FAHD2BQ6P2I3 314 aaPredicted RBP12.45□□□□□ -0.42
PRPF3-201ENST00000324862 SLC25A48Q6ZT89 311 aaKnown RBP12.45□□□□□ -0.42
PRPF3-201ENST00000324862 SLC38A6Q8IZM9 456 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 EDARADDQ8WWZ3 215 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 FAHD2AQ96GK7 314 aa12.45□□□□□ -0.42
PRPF3-201ENST00000324862 METTL8Q9H825 291 aaKnown RBP12.45□□□□□ -0.42
PRPF3-201ENST00000324862 POLR3KQ9Y2Y1 108 aaPredicted RBP12.45□□□□□ -0.42
PRPF3-201ENST00000324862 B4DSR2 109 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 J3QR06 171 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 TOX4O94842 621 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 TGFAP01135 160 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 AVPP01185 164 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 IGHV4-31P0DP07 118 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 UCP3P55916 312 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 SLC9A3R2Q15599 337 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 ABCA11PQ4W5N1 156 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 LIN54Q6MZP7 749 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 SLC25A42Q86VD7 318 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 OR10A7Q8NGE5 316 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 OR51H1Q8NH63 302 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 RTN4IP1Q8WWV3 396 aaPredicted RBP12.44□□□□□ -0.42
PRPF3-201ENST00000324862 RAB9BQ9NP90 201 aa12.44□□□□□ -0.42
PRPF3-201ENST00000324862 C14orf166Q9Y224 244 aaKnown RBP12.44□□□□□ -0.42
PRPF3-201ENST00000324862 A0A087X0M5 115 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 A0A1B0GX30 115 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 M0R1W7 72 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 RGS11O94810 467 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 PRTN3P24158 256 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 RPL30P62888 115 aaKnown RBP12.43□□□□□ -0.42
PRPF3-201ENST00000324862 DHRS2Q13268 280 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 SURF2Q15527 256 aaPredicted RBP12.43□□□□□ -0.42
PRPF3-201ENST00000324862 OR2B11Q5JQS5 317 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 TBC1D26Q86UD7 250 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 ZNF645Q8N7E2 425 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 CASTOR1Q8WTX7 329 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 LHX4Q969G2 390 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.43□□□□□ -0.422e-7■■■■■ 27.1
PRPF3-201ENST00000324862 ABCA1O95477 2261 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 GPR31O00270 319 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 PGLYRP1O75594 196 aaPredicted RBP12.43□□□□□ -0.42
PRPF3-201ENST00000324862 HLA-AP01891 365 aaKnown RBP12.43□□□□□ -0.42
PRPF3-201ENST00000324862 HOXB4P17483 251 aaPredicted RBP12.43□□□□□ -0.42
PRPF3-201ENST00000324862 GPR12P47775 334 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 PAX8Q06710 450 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 DCAF12L2Q5VW00 463 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 GLDNQ6ZMI3 551 aaPredicted RBP12.43□□□□□ -0.42
PRPF3-201ENST00000324862 ZFAND1Q8TCF1 268 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 C17orf50Q8WW18 174 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 TMEM186Q96B77 213 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 ZNF251Q9BRH9 671 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 KPTNQ9Y664 436 aa12.43□□□□□ -0.42
PRPF3-201ENST00000324862 LINC00473A8K010 186 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 CYSRT1A8MQ03 144 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 ZNF16P17020 682 aaPredicted RBP12.42□□□□□ -0.42
PRPF3-201ENST00000324862 MECP2P51608 486 aaKnown RBP12.42□□□□□ -0.42
PRPF3-201ENST00000324862 LHFPL4Q7Z7J7 247 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 BVESQ8NE79 360 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 OR9G1Q8NH87 305 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 TP53RKQ96S44 253 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 CLEC7AQ9BXN2 247 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 TEX13DA0A0J9YY54 714 aaPredicted RBP12.42□□□□□ -0.42
PRPF3-201ENST00000324862 hCG_1809904A0A1W2PP81 198 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 A0A1W2PPE2 198 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 A0A1W2PR64 198 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 A0A1W2PRV1 198 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 A8MV72 311 aaPredicted RBP12.42□□□□□ -0.42
PRPF3-201ENST00000324862 DHFRP00374 187 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 IGLV1-47P01700 117 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 C11orf91Q3C1V1 193 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 CADM3Q8N126 398 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms