RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ABHD14BQ96IU4 210 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 LPAR5Q9H1C0 372 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 FBXL15Q9H469 300 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 TPSG1Q9NRR2 321 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 GHRLQ9UBU3 117 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 AK3Q9UIJ7 227 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 GAB2Q9UQC2 676 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 LSM4Q9Y4Z0 139 aaKnown RBP9.59□□□□□ -0.87
TPM3-204ENST00000323144 A3GALT2U3KPV4 340 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 TENM3Q9P273 2699 aa9.59□□□□□ -0.88
TPM3-204ENST00000323144 A0A1W2PN81 502 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 FOXI3A8MTJ6 420 aaPredicted RBP9.58□□□□□ -0.88
TPM3-204ENST00000323144 H0YJW9 148 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 SOCS1O15524 211 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 RGS11O94810 467 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 BPNT1O95861 308 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 UCHL1P09936 223 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 CHRNA7P36544 502 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 SLURP1P55000 103 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 ZNF616Q08AN1 781 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 IRF3Q14653 427 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 STEAP3Q658P3 488 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 GLT8D1Q68CQ7 371 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 FAM71F2Q6NXP2 309 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 MOB1BQ7L9L4 216 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 CEACAM19Q7Z692 300 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 NPBQ8NG41 125 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 OR6M1Q8NGM8 313 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 TMEM203Q969S6 136 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 WWC2-AS2Q96NR7 200 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 ASCL2Q99929 193 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 FAM103A1Q9BTL3 118 aaKnown RBP9.58□□□□□ -0.88
TPM3-204ENST00000323144 ABRACLQ9P1F3 81 aa9.58□□□□□ -0.88
TPM3-204ENST00000323144 NKX1-2Q9UD57 310 aaPredicted RBP9.58□□□□□ -0.88
TPM3-204ENST00000323144 HUWE1Q7Z6Z7 4374 aaKnown RBP9.57□□□□□ -0.88
TPM3-204ENST00000323144 PTGES3LE9PB15 166 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 RAMP3O60896 148 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 LY86O95711 162 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 OR8U8P0C7N1 319 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 CT45A6P0DMU7 189 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 CT45A5P0DMU8 189 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 CT45A7P0DMV0 189 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 CLDN12P56749 244 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 PLA2G7Q13093 441 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 DCTN2Q13561 401 aaKnown RBP9.57□□□□□ -0.88
TPM3-204ENST00000323144 SPHARQ15513 63 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 LY6G6FQ5SQ64 297 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 TMEM91Q6ZNR0 172 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 NRG4Q8WWG1 115 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 UBE2E2Q96LR5 201 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.57□□□□□ -0.88
TPM3-204ENST00000323144 KIAA1456Q9P272 454 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 STEAP1Q9UHE8 339 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 SLC23A1Q9UHI7 598 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 VSIG4Q9Y279 399 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 ZNF256Q9Y2P7 627 aaPredicted RBP9.57□□□□□ -0.88
TPM3-204ENST00000323144 STAB2Q8WWQ8 2551 aa9.57□□□□□ -0.88
TPM3-204ENST00000323144 IGHV4OR15-8A0A075B7B6 117 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 A0A087WW49 117 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 IGKV1-6A0A0C4DH72 117 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 OR5H14A6NHG9 310 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 FCN1O00602 326 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 RRHO14718 337 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 EGR2P11161 476 aaPredicted RBP9.56□□□□□ -0.88
TPM3-204ENST00000323144 CRIP2P52943 208 aaPredicted RBP9.56□□□□□ -0.88
TPM3-204ENST00000323144 LINC00205P59089 165 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 RUNX1Q01196 453 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 RNLSQ5VYX0 342 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 TMEM65Q6PI78 240 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 HAPLN4Q86UW8 402 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 MS4A15Q8N5U1 240 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 DRAXINQ8NBI3 349 aaPredicted RBP9.56□□□□□ -0.88
TPM3-204ENST00000323144 MINDY2Q8NBR6 621 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 OR1N2Q8NGR9 330 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 KCNG3Q8TAE7 436 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 ABHD5Q8WTS1 349 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 DCUN1D4Q92564 292 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 UFD1Q92890 307 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 PLGRKTQ9HBL7 147 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 C12orf4Q9NQ89 552 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 FOXA2Q9Y261 457 aaPredicted RBP9.56□□□□□ -0.88
TPM3-204ENST00000323144 WASHC3Q9Y3C0 194 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 AK6Q9Y3D8 172 aaKnown RBP9.56□□□□□ -0.88
TPM3-204ENST00000323144 U3KQK5 164 aa9.56□□□□□ -0.88
TPM3-204ENST00000323144 TRBV6-6A0A0A6YYG2 114 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 SLC17A2O00624 439 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 RAB29O14966 203 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 CA2P00918 260 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 IGHV3-11P01762 117 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 LGALS1P09382 135 aaKnown RBP9.55□□□□□ -0.88
TPM3-204ENST00000323144 SCTP09683 121 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 HSMCR30P0CW71 290 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 SRMP19623 302 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 RAB9AP51151 201 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 CX3CL1P78423 397 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 DEFA5Q01523 94 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 PLGLAQ15195 96 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 LIN54Q6MZP7 749 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 ARPC1AQ92747 370 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 C5orf30Q96GV9 206 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms