RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SLC25A31Q9H0C2 315 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 RNF115Q9Y4L5 304 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 PIGBOS1A0A0B4J2F0 54 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 TMEM218A2RU14 115 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 RAMP3O60896 148 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 PITX3O75364 302 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 C1QL1O75973 258 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 SEC11BP0C7V7 166 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 CFHR2P36980 270 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 EDDM3BP56851 147 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 RPS23P62266 143 aaKnown RBP6.32□□□□□ -1.4
IFT88-201ENST00000319980 BLOC1S1P78537 153 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 PJVKQ0ZLH3 352 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 BTNL3Q6UXE8 466 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 TMEM108Q6UXF1 575 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 WFDC8Q8IUA0 241 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 FGFRL1Q8N441 504 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 LRRC46Q96FV0 321 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 ABHD14BQ96IU4 210 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 LURAP1Q96LR2 239 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 ARV1Q9H2C2 271 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 TREM1Q9NP99 234 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 FAM96BQ9Y3D0 163 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 RELNP78509 3460 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 IGF2RP11717 2491 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 NUPL2O15504 423 aaKnown RBP6.32□□□□□ -1.4
IFT88-201ENST00000319980 SPINT2O43291 252 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 KRASP01116 189 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 PRH1P02810 166 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 WNT2P09544 360 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 SPP1P10451 314 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 PAX9P55771 341 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 LINC00205P59089 165 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 RPL30P62888 115 aaKnown RBP6.32□□□□□ -1.4
IFT88-201ENST00000319980 ZNF616Q08AN1 781 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 OR10Z1Q8NGY1 313 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 LSM10Q969L4 123 aaKnown RBP6.32□□□□□ -1.4
IFT88-201ENST00000319980 GINS3Q9BRX5 216 aa6.32□□□□□ -1.4
IFT88-201ENST00000319980 ODAMA1E959 279 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 RNF212BA8MTL3 300 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 KIAA1324LA8MWY0 1029 aaPredicted RBP6.31□□□□□ -1.4
IFT88-201ENST00000319980 ST8SIA5O15466 376 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 IGHV3-7P01780 117 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 C1QTNF9P0C862 333 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 DANCRP0C864 163 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 SLC25A6P12236 298 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 F2RL1P55085 397 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 TNFAIP6P98066 277 aaPredicted RBP6.31□□□□□ -1.4
IFT88-201ENST00000319980 ZNF816Q0VGE8 651 aaPredicted RBP6.31□□□□□ -1.4
IFT88-201ENST00000319980 ZNF266Q14584 549 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 IL34Q6ZMJ4 242 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 ODF3L1Q8IXM7 274 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 DEFB108BQ8NET1 73 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 C5orf30Q96GV9 206 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 GCM1Q9NP62 436 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 PARP11Q9NR21 331 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 PSG11Q9UQ72 335 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 RFNGQ9Y644 331 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 NUDT19A8MXV4 375 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 C15orf65H3BRN8 121 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 MGST3O14880 152 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 LHBP01229 141 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 IGHV1-46P01743 117 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 SELLP14151 372 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 GZMHP20718 246 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 DYNLT3P51808 116 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 C4orf48Q5BLP8 95 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 BTNL8Q6UX41 500 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 ZBTB34Q8NCN2 500 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 PPP1R35Q8TAP8 253 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 ZCCHC14Q8WYQ9 949 aaKnown RBP6.31□□□□□ -1.4
IFT88-201ENST00000319980 SNX22Q96L94 193 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 TSNAXQ99598 290 aaKnown RBP6.31□□□□□ -1.4
IFT88-201ENST00000319980 GNG12Q9UBI6 72 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 F8W036 122 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 TSPAN4O14817 238 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 SYNGR2O43760 224 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 ATG12O94817 140 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 IAPPP10997 89 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 MMP9P14780 707 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 MUC1P15941 1255 aaPredicted RBP6.31□□□□□ -1.4
IFT88-201ENST00000319980 ADCYAP1P18509 176 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 PTAFRP25105 342 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 CD80P33681 288 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 G6PCP35575 357 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 CAMLGP49069 296 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 RPL23AP62750 156 aaKnown RBP6.31□□□□□ -1.4
IFT88-201ENST00000319980 CCL8P80075 99 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 TMEM182Q6ZP80 229 aaPredicted RBP6.31□□□□□ -1.4
IFT88-201ENST00000319980 FAM90A1Q86YD7 464 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 SPAG16Q8N0X2 631 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 ZCCHC24Q8N2G6 241 aaKnown RBP6.31□□□□□ -1.4
IFT88-201ENST00000319980 TCTEX1D2Q8WW35 142 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 AGMATQ9BSE5 352 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 UQCC1Q9NVA1 299 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 ELOVL5Q9NYP7 299 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 IL19Q9UHD0 177 aa6.31□□□□□ -1.4
IFT88-201ENST00000319980 DPRXA6NFQ7 191 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 C17orf98A8MV24 154 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 K7N7A8 449 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms