RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 NKX6-1P78426 367 aaPredicted RBP13.33□□□□□ -0.28
SHISA2-201ENST00000319420 Q6ZRM9 215 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 NEUROG1Q92886 237 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 SMIM8Q96KF7 97 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 FAM74A7A6NL05 159 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 FAM90A27PA6NNH2 459 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 JTBO76095 146 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 IAPPP10997 89 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 VAMP2P63027 116 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 FAM74A3Q4VXF1 159 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 UTF1Q5T230 341 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 TMEM108Q6UXF1 575 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 CABLES2Q9BTV7 478 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 GNG12Q9UBI6 72 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 CACNG5Q9UF02 275 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 POMT1Q9Y6A1 747 aa13.33□□□□□ -0.28
SHISA2-201ENST00000319420 YLPM1P49750 1951 aaKnown RBP13.32□□□□□ -0.28
SHISA2-201ENST00000319420 TRBV6-6A0A0A6YYG2 114 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 DPRXA6NFQ7 191 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 CHST1O43916 411 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 GPR137BO60478 399 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 TMEM50AO95807 157 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 UCP1P25874 307 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 RND3P61587 244 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 RPS16P62249 146 aaKnown RBP13.32□□□□□ -0.28
SHISA2-201ENST00000319420 MBNL3Q9NUK0 354 aaKnown RBP13.32□□□□□ -0.28
SHISA2-201ENST00000319420 ITPR1Q14643 2758 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 VDAC1P21796 283 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 SULT1A2P50226 295 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 ERVFRD-1P60508 538 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 EIF2S3LQ2VIR3 472 aaKnown RBP13.32□□□□□ -0.28
SHISA2-201ENST00000319420 MOB1BQ7L9L4 216 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 NANPQ8TBE9 248 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 GPR146Q96CH1 333 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 SPOCK3Q9BQ16 436 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 TLNRD1Q9H1K6 362 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 TREM1Q9NP99 234 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 MMP26Q9NRE1 261 aa13.32□□□□□ -0.28
SHISA2-201ENST00000319420 DSCAMO60469 2012 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 H0Y980 276 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 IGKV1-39P01597 117 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 GAPDHP04406 335 aaKnown RBP13.31□□□□□ -0.28
SHISA2-201ENST00000319420 IGKV1D-39P04432 117 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 OR4A8P0C604 315 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 PJVKQ0ZLH3 352 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 SPINK9Q5DT21 86 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 CLRN3Q8NCR9 226 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 C11orf1Q9H5F2 150 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 IGSF23A1L1A6 192 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 DNASE2O00115 360 aaPredicted RBP13.31□□□□□ -0.28
SHISA2-201ENST00000319420 RBMXL2O75526 392 aaKnown RBP13.31□□□□□ -0.28
SHISA2-201ENST00000319420 IGHV1-46P01743 117 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 GYPAP02724 150 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 MUC1P15941 1255 aaPredicted RBP13.31□□□□□ -0.28
SHISA2-201ENST00000319420 P2RY1P47900 373 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 RPL30P62888 115 aaKnown RBP13.31□□□□□ -0.28
SHISA2-201ENST00000319420 HMGN3Q15651 99 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 NMSQ5H8A3 153 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 Q6ZRG5 221 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 UBAC2Q8NBM4 344 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 WFIKKN1Q96NZ8 548 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 CCL13Q99616 98 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 RHOFQ9HBH0 211 aa13.31□□□□□ -0.28
SHISA2-201ENST00000319420 OOEPA6NGQ2 149 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 SRRM5B3KS81 715 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 C9JQL5 133 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 ATG12O94817 140 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 GRNP28799 593 aaKnown RBP13.3□□□□□ -0.28
SHISA2-201ENST00000319420 TMPRSS3P57727 454 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 SRPXP78539 464 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 EWSR1Q01844 656 aaKnown RBP eCLIP13.3□□□□□ -0.28
SHISA2-201ENST00000319420 UQCC3Q6UW78 93 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 ODF3L1Q8IXM7 274 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 PUSL1Q8N0Z8 303 aaKnown RBP13.3□□□□□ -0.28
SHISA2-201ENST00000319420 TCTEX1D2Q8WW35 142 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 BOD1Q96IK1 185 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 GCM1Q9NP62 436 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 THBDP07204 575 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 ZNF616Q08AN1 781 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 TMEM267Q0VDI3 215 aaPredicted RBP13.3□□□□□ -0.28
SHISA2-201ENST00000319420 MRGPRGQ86SM5 289 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 OR2C3Q8N628 320 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 RND1Q92730 232 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 GSN-AS1Q9NRJ2 163 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 RNF224P0DH78 156 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 G6PCP35575 357 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 SSTP61278 116 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 EIF5AP63241 154 aaKnown RBP13.3□□□□□ -0.28
SHISA2-201ENST00000319420 BTNL8Q6UX41 500 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 FAM216BQ8N7L0 139 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 LINC01560Q8TB33 94 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 SAT2Q96F10 170 aaPredicted RBP13.3□□□□□ -0.28
SHISA2-201ENST00000319420 C5orf30Q96GV9 206 aa13.3□□□□□ -0.28
SHISA2-201ENST00000319420 TSNAXQ99598 290 aaKnown RBP13.3□□□□□ -0.28
SHISA2-201ENST00000319420 PRH1P02810 166 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 NFYBP25208 207 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 LMO1P25800 156 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 BLOC1S1P78537 153 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 GPR157Q5UAW9 335 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 SLC35E4Q6ICL7 350 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms